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Report for CCDS12426.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12426.1 Public Homo sapiens 19 FAAP24 24 110 108 CCDS HistoryNCBI Gene:91442Re-query CCDS DB by CCDS ID:12426.1Re-query CCDS DB by GeneID:91442See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12426.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000588258.6 ENSP00000466121.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000588258.6Link to Ensembl Protein Viewer:ENSP00000466121.1Re-query CCDS DB by Nucleotide ID:ENST00000588258Re-query CCDS DB by Protein ID:ENSP00000466121
Original member Current member EBI ENST00000590281.1 ENSP00000468475.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590281.1Link to Ensembl Protein Viewer:ENSP00000468475.1Re-query CCDS DB by Nucleotide ID:ENST00000590281Re-query CCDS DB by Protein ID:ENSP00000468475
Original member Current member EBI ENST00000699960.1 ENSP00000514718.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699960.1Link to Ensembl Protein Viewer:ENSP00000514718.1Re-query CCDS DB by Nucleotide ID:ENST00000699960Re-query CCDS DB by Protein ID:ENSP00000514718
Original member Current member NCBI NM_152266.5 NP_689479.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152266.5Link to Protein Sequence:NP_689479.1Re-query CCDS DB by Nucleotide ID:NM_152266Re-query CCDS DB by Protein ID:NP_689479Link to BLAST:NP_689479.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689479.1 215 Q9BTP7 215 100% 0 0

Chromosomal Locations for CCDS 12426.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 32973197 32973302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32973426 32973562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32974060 32974212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 32976431 32976682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (648 nt):
ATGGAAAAGAACCCCCCTGATGATACGGGCCCCGTGCACGTGCCTTTGGGGCATATTGTGGCCAATGAGA
AATGGCGCGGGTCACAGCTGGCGCAGGAGATGCAAGGGAAAATTAAGCTCATTTTCGAGGATGGCTTGAC
ACCAGACTTTTATCTGTCGAACAGATGCTGCATTCTTTATGTCACCGAAGCTGATTTGGTGGCAGGAAAT
GGCTACAGAAAGAGGCTTGTTCGGGTTAGAAATTCCAATAATCTTAAAGGAATTGTAGTCGTTGAAAAAA
CCCGGATGAGTGAACAATACTTCCCAGCCCTACAGAAGTTTACTGTGCTGGACCTTGGAATGGTGCTGCT
TCCAGTGGCCAGCCAGATGGAAGCATCCTGCCTCGTCATCCAGTTGGTTCAAGAGCAAACCAAAGAGCCC
AGTAAGAACCCTCTTCTCGGGAAGAAACGGGCCCTGCTGCTGTCTGAGCCTTCGCTCCTTCGAACCGTGC
AGCAGATCCCAGGAGTTGGAAAAGTTAAAGCTCCCCTTCTCCTCCAGAAGTTTCCAAGCATCCAGCAACT
GAGTAATGCTTCCATTGGGGAACTGGAGCAGGTGGTCGGACAAGCAGTGGCACAGCAGATCCATGCCTTC
TTCACGCAGCCCAGGTGA

Translation (215 aa):
MEKNPPDDTGPVHVPLGHIVANEKWRGSQLAQEMQGKIKLIFEDGLTPDFYLSNRCCILYVTEADLVAGN
GYRKRLVRVRNSNNLKGIVVVEKTRMSEQYFPALQKFTVLDLGMVLLPVASQMEASCLVIQLVQEQTKEP
SKNPLLGKKRALLLSEPSLLRTVQQIPGVGKVKAPLLLQKFPSIQQLSNASIGELEQVVGQAVAQQIHAF
FTQPR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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