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Report for CCDS9564.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9564.1 Public Homo sapiens 14 NDRG2 24 110 108 CCDS HistoryNCBI Gene:57447Re-query CCDS DB by CCDS ID:9564.1Re-query CCDS DB by GeneID:57447See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9564.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000350792.7 ENSP00000344620.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000350792.7Link to Ensembl Protein Viewer:ENSP00000344620.3Re-query CCDS DB by Nucleotide ID:ENST00000350792Re-query CCDS DB by Protein ID:ENSP00000344620
Original member Current member EBI ENST00000360463.7 ENSP00000353649.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360463.7Link to Ensembl Protein Viewer:ENSP00000353649.3Re-query CCDS DB by Nucleotide ID:ENST00000360463Re-query CCDS DB by Protein ID:ENSP00000353649
Original member Current member EBI ENST00000554143.5 ENSP00000452006.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000554143.5Link to Ensembl Protein Viewer:ENSP00000452006.1Re-query CCDS DB by Nucleotide ID:ENST00000554143Re-query CCDS DB by Protein ID:ENSP00000452006
Original member Current member EBI ENST00000555158.5 ENSP00000452038.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555158.5Link to Ensembl Protein Viewer:ENSP00000452038.1Re-query CCDS DB by Nucleotide ID:ENST00000555158Re-query CCDS DB by Protein ID:ENSP00000452038
Original member Current member EBI ENST00000553503.5 ENSP00000452306.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000553503.5Link to Ensembl Protein Viewer:ENSP00000452306.1Re-query CCDS DB by Nucleotide ID:ENST00000553503Re-query CCDS DB by Protein ID:ENSP00000452306
Original member Current member NCBI NM_001282213.2 NP_001269142.1 Accepted alive Link to Nucleotide Sequence:NM_001282213.2Link to Protein Sequence:NP_001269142.1Re-query CCDS DB by Nucleotide ID:NM_001282213Re-query CCDS DB by Protein ID:NP_001269142Link to BLAST:NP_001269142.1
Original member Current member NCBI NM_001282214.2 NP_001269143.1 Accepted alive Link to Nucleotide Sequence:NM_001282214.2Link to Protein Sequence:NP_001269143.1Re-query CCDS DB by Nucleotide ID:NM_001282214Re-query CCDS DB by Protein ID:NP_001269143Link to BLAST:NP_001269143.1
Original member Current member NCBI NM_001354561.2 NP_001341490.1 Accepted alive Link to Nucleotide Sequence:NM_001354561.2Link to Protein Sequence:NP_001341490.1Re-query CCDS DB by Nucleotide ID:NM_001354561Re-query CCDS DB by Protein ID:NP_001341490Link to BLAST:NP_001341490.1
Original member Current member NCBI NM_001354568.2 NP_001341497.1 Accepted alive Link to Nucleotide Sequence:NM_001354568.2Link to Protein Sequence:NP_001341497.1Re-query CCDS DB by Nucleotide ID:NM_001354568Re-query CCDS DB by Protein ID:NP_001341497Link to BLAST:NP_001341497.1
Original member Current member NCBI NM_001354569.1 NP_001341498.1 Accepted alive Link to Nucleotide Sequence:NM_001354569.1Link to Protein Sequence:NP_001341498.1Re-query CCDS DB by Nucleotide ID:NM_001354569Re-query CCDS DB by Protein ID:NP_001341498Link to BLAST:NP_001341498.1
Original member Current member NCBI NM_016250.3 NP_057334.1 Accepted alive Link to Nucleotide Sequence:NM_016250.3Link to Protein Sequence:NP_057334.1Re-query CCDS DB by Nucleotide ID:NM_016250Re-query CCDS DB by Protein ID:NP_057334Link to BLAST:NP_057334.1
Original member Current member NCBI NM_201536.2 NP_963294.1 Accepted alive Link to Nucleotide Sequence:NM_201536.2Link to Protein Sequence:NP_963294.1Re-query CCDS DB by Nucleotide ID:NM_201536Re-query CCDS DB by Protein ID:NP_963294Link to BLAST:NP_963294.1
Original member Current member NCBI NM_201538.2 NP_963832.1 Accepted alive Link to Nucleotide Sequence:NM_201538.2Link to Protein Sequence:NP_963832.1Re-query CCDS DB by Nucleotide ID:NM_201538Re-query CCDS DB by Protein ID:NP_963832Link to BLAST:NP_963832.1
Original member Current member NCBI NM_201541.2 NP_963835.1 Accepted alive Link to Nucleotide Sequence:NM_201541.2Link to Protein Sequence:NP_963835.1Re-query CCDS DB by Nucleotide ID:NM_201541Re-query CCDS DB by Protein ID:NP_963835Link to BLAST:NP_963835.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269142.1 357 Q9UN36-2 357 100% 0 0
NP_001269143.1 357 Q9UN36-2 357 100% 0 0
NP_001341490.1 357 Q9UN36-2 357 100% 0 0
NP_001341497.1 357 Q9UN36-2 357 100% 0 0
NP_001341498.1 357 Q9UN36-2 357 100% 0 0
NP_057334.1 357 Q9UN36-2 357 100% 0 0
NP_963294.1 357 Q9UN36-2 357 100% 0 0
NP_963832.1 357 Q9UN36-2 357 100% 0 0
NP_963835.1 357 Q9UN36-2 357 100% 0 0

Chromosomal Locations for CCDS 9564.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21017596 21017762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21017987 21018038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21018204 21018239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21018457 21018504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21018763 21018814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21019116 21019160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21019639 21019742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21019920 21019976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21020496 21020582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21020784 21020844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21021817 21021879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21022062 21022182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21022392 21022497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21023241 21023315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1074 nt):
ATGGCGGAGCTGCAGGAGGTGCAGATCACAGAGGAGAAGCCACTGTTGCCAGGACAGACGCCTGAGGCGG
CCAAGACTCACTCTGTGGAGACACCATACGGCTCTGTCACTTTCACTGTCTATGGCACCCCCAAACCCAA
ACGCCCAGCGATCCTTACCTACCACGATGTGGGACTCAACTATAAATCTTGCTTCCAGCCACTGTTTCAG
TTCGAGGACATGCAGGAAATCATTCAGAACTTTGTGCGGGTTCATGTGGATGCCCCTGGAATGGAAGAGG
GAGCCCCTGTGTTCCCTTTGGGATATCAGTACCCATCTCTGGACCAGCTTGCAGACATGATCCCTTGCGT
CCTGCAGTACCTAAATTTCTCTACAATAATTGGAGTTGGTGTTGGAGCTGGAGCCTACATCCTGGCGAGA
TATGCTCTTAACCACCCGGACACTGTTGAAGGTCTTGTCCTCATCAACATTGATCCCAATGCCAAGGGTT
GGATGGATTGGGCAGCCCACAAGCTAACAGGCCTCACCTCTTCCATTCCGGAGATGATCCTTGGACATCT
TTTCAGCCAGGAAGAGCTCTCTGGAAATTCTGAGTTGATACAAAAGTACAGAAATATCATTACACATGCA
CCCAACCTGGATAACATTGAATTGTACTGGAACAGCTACAACAACCGCCGAGACCTGAACTTTGAGCGTG
GAGGTGATATCACCCTCAGGTGTCCTGTGATGCTGGTGGTAGGAGACCAAGCACCTCATGAAGATGCAGT
GGTGGAATGTAACTCAAAACTGGACCCCACCCAGACCTCGTTCCTCAAGATGGCTGACTCCGGAGGTCAG
CCCCAGCTGACTCAGCCAGGCAAGCTGACCGAGGCCTTCAAGTACTTCCTGCAAGGCATGGGCTACATGG
CCTCATCCTGCATGACTCGCCTGTCCCGGTCTCGTACAGCCTCTCTGACCAGTGCAGCATCCGTTGATGG
CAACCGGTCCCGCTCTCGCACCCTGTCCCAGAGCAGCGAGTCTGGAACTCTTTCTTCGGGGCCCCCGGGG
CACACCATGGAGGTCTCCTGTTGA

Translation (357 aa):
MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQ
FEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILAR
YALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHA
PNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQ
PQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPG
HTMEVSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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