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Report for CCDS9547.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9547.1 Public Homo sapiens 14 CCNB1IP1 24 110 108 CCDS HistoryNCBI Gene:57820Re-query CCDS DB by CCDS ID:9547.1Re-query CCDS DB by GeneID:57820See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9547.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000353689.8 ENSP00000337396.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000353689.8Link to Ensembl Protein Viewer:ENSP00000337396.4Re-query CCDS DB by Nucleotide ID:ENST00000353689Re-query CCDS DB by Protein ID:ENSP00000337396
Original member Current member EBI ENST00000358932.9 ENSP00000351810.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358932.9Link to Ensembl Protein Viewer:ENSP00000351810.4Re-query CCDS DB by Nucleotide ID:ENST00000358932Re-query CCDS DB by Protein ID:ENSP00000351810
Original member Current member EBI ENST00000398160.6 ENSP00000381226.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398160.6Link to Ensembl Protein Viewer:ENSP00000381226.2Re-query CCDS DB by Nucleotide ID:ENST00000398160Re-query CCDS DB by Protein ID:ENSP00000381226
Original member Current member EBI ENST00000398163.6 ENSP00000381229.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398163.6Link to Ensembl Protein Viewer:ENSP00000381229.2Re-query CCDS DB by Nucleotide ID:ENST00000398163Re-query CCDS DB by Protein ID:ENSP00000381229
Original member Current member EBI ENST00000398169.7 ENSP00000381235.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398169.7Link to Ensembl Protein Viewer:ENSP00000381235.3Re-query CCDS DB by Nucleotide ID:ENST00000398169Re-query CCDS DB by Protein ID:ENSP00000381235
Original member Current member EBI ENST00000437553.6 ENSP00000409896.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437553.6Link to Ensembl Protein Viewer:ENSP00000409896.2Re-query CCDS DB by Nucleotide ID:ENST00000437553Re-query CCDS DB by Protein ID:ENSP00000409896
Original member Current member NCBI NM_021178.5 NP_067001.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021178.5Link to Protein Sequence:NP_067001.3Re-query CCDS DB by Nucleotide ID:NM_021178Re-query CCDS DB by Protein ID:NP_067001Link to BLAST:NP_067001.3
Original member Current member NCBI NM_182849.3 NP_878269.1 Accepted alive Link to Nucleotide Sequence:NM_182849.3Link to Protein Sequence:NP_878269.1Re-query CCDS DB by Nucleotide ID:NM_182849Re-query CCDS DB by Protein ID:NP_878269Link to BLAST:NP_878269.1
Original member Current member NCBI NM_182852.4 NP_878272.1 Accepted alive Link to Nucleotide Sequence:NM_182852.4Link to Protein Sequence:NP_878272.1Re-query CCDS DB by Nucleotide ID:NM_182852Re-query CCDS DB by Protein ID:NP_878272Link to BLAST:NP_878272.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067001.3 277 Q9NPC3 277 100% 0 0
NP_878269.1 277 Q9NPC3 277 100% 0 0
NP_878272.1 277 Q9NPC3 277 100% 0 0

Chromosomal Locations for CCDS 9547.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20311550 20311752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20313468 20313801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20316227 20316523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGTCTTTGTGTGAAGACATGCTGCTTTGTAATTATCGAAAGTGTCGCATCAAACTCTCTGGCTATGCAT
GGGTCACTGCCTGCTCTCACATCTTCTGTGATCAGCATGGCAGTGGTGAGTTTAGTCGCTCACCAGCTAT
CTGTCCTGCCTGCAACAGTACCCTTTCTGGAAAGCTAGATATTGTCCGCACAGAACTCAGTCCATCAGAG
GAATATAAAGCTATGGTATTGGCAGGACTGCGACCAGAGATCGTGTTGGACATTAGCTCCCGAGCGCTGG
CCTTCTGGACATATCAGGTACATCAGGAACGTCTCTATCAAGAATACAATTTCAGCAAGGCTGAGGGCCA
TCTGAAACAGATGGAGAAGATATATACTCAGCAAATACAAAGCAAGGATGTAGAATTGACCTCTATGAAA
GGGGAGGTTACCTCCATGAAGAAAGTACTAGAAGAATACAAGAAAAAGTTCAGTGACATCTCTGAGAAAC
TTATGGAGCGCAATCGTCAGTATCAAAAGCTCCAAGGCCTCTATGATAGCCTTAGGCTACGAAACATCAC
TATTGCTAACCATGAAGGCACCCTTGAACCATCCATGATTGCACAGTCTGGTGTTCTTGGCTTCCCATTA
GGTAACAACTCCAAGTTTCCTTTGGATAATACACCTGTTCGAAATCGGGGCGATGGAGATGGAGATTTTC
AGTTCAGACCATTTTTTGCGGGTTCTCCCACAGCACCTGAACCCAGCAACAGCTTTTTTAGTTTTGTCTC
TCCAAGTCGTGAATTAGAGCAGCAGCAAGTTTCTAGCAGGGCCTTCAAAGTAAAAAGAATTTGA

Translation (277 aa):
MSLCEDMLLCNYRKCRIKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSE
EYKAMVLAGLRPEIVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQMEKIYTQQIQSKDVELTSMK
GEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANHEGTLEPSMIAQSGVLGFPL
GNNSKFPLDNTPVRNRGDGDGDFQFRPFFAGSPTAPEPSNSFFSFVSPSRELEQQQVSSRAFKVKRI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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