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Report for CCDS9313.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9313.1 Public Homo sapiens 13 MTMR6 24 110 108 CCDS HistoryNCBI Gene:9107Re-query CCDS DB by CCDS ID:9313.1Re-query CCDS DB by GeneID:9107See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9313.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381801.6 ENSP00000371221.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381801.6Link to Ensembl Protein Viewer:ENSP00000371221.5Re-query CCDS DB by Nucleotide ID:ENST00000381801Re-query CCDS DB by Protein ID:ENSP00000371221
Original member Current member NCBI NM_004685.5 NP_004676.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004685.5Link to Protein Sequence:NP_004676.3Re-query CCDS DB by Nucleotide ID:NM_004685Re-query CCDS DB by Protein ID:NP_004676Link to BLAST:NP_004676.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004676.3 621 Q9Y217-1 621 100% 0 0

Chromosomal Locations for CCDS 9313.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 25249232 25249492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25251649 25251775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25251853 25251984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25253764 25253964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25254385 25254434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25257196 25257321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25257736 25257845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25258560 25258692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25261668 25261802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25265819 25265947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25266129 25266286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25267779 25267941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25274071 25274187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 25287224 25287247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGGAGCATATCCGGACGACCAAGGTCGAACAAGTAAAATTACTTGACCGATTCAGTACCAGCAACAAGT
CATTAACAGGAACACTGTATCTTACGGCTACACATCTATTATTTATCGACTCTCATCAAAAAGAAACCTG
GATATTACACCACCATATTGCCTCAGTAGAGAAACTTGCTTTGACTACTTCTGGATGCCCCCTTGTGATA
CAGTGCAAGAACTTCAGAACTGTGCATTTCATTGTTCCCAGAGAAAGAGATTGCCATGATATTTACAACT
CTTTGCTACAACTGTCAAAACAAGCAAAATATGAAGATCTCTATGCATTTTCTTATAATCCCAAACAAAA
TGATTCAGAACGACTACAAGGCTGGCAGCTCATTGATCTCGCTGAGGAATATAAGAGGATGGGAGTGCCA
AACTCACACTGGCAGTTGTCTGATGCCAACCGGGACTACAAGATTTGTGAAACTTACCCCAGAGAACTTT
ATGTTCCCCGGATAGCAAGCAAACCAATAATTGTTGGTAGTTCCAAGTTCCGGAGCAAGGGAAGATTCCC
AGTTCTTTCCTACTATCATCAAGATAAGGAGGCTGCCATTTGTCGATGTAGTCAGCCACTCTCTGGATTC
AGTGCCAGGTGCCTGGAGGATGAACATTTGCTTCAAGCCATTAGTAAAGCCAATCCAGTCAATCGCTATA
TGTACGTCATGGATACCAGGCCAAAACTGAATGCAATGGCCAACAGAGCAGCTGGAAAAGGTTATGAAAA
TGAAGACAACTATTCCAATATTAGATTTCAGTTTGTTGGAATTGAAAATATTCATGTCATGAGGTCCAGC
CTTCAGAAATTATTGGAAGTCAATGGCACTAAAGGGCTTTCTGTCAATGATTTCTACTCCGGTTTGGAGA
GCTCGGGATGGCTTCGCCATATCAAAGCTGTTATGGATGCTGCAATCTTCTTGGCCAAAGCAATAACAGT
TGAAAATGCAAGTGTGTTGGTGCATTGTTCCGATGGTTGGGATAGGACTTCCCAGGTTTGTTCCCTGGGT
TCTCTTTTATTGGATTCCTACTACAGGACAATCAAAGGATTCATGGTTTTAATAGAAAAGGATTGGATCT
CTTTTGGACATAAATTTTCAGAGAGGTGTGGCCAGTTGGATGGTGACCCAAAGGAAGTCTCACCAGTGTT
TACTCAGTTCTTGGAATGTGTGTGGCATTTGACCGAACAGTTTCCACAAGCCTTTGAATTCAGTGAAGCA
TTTCTTCTTCAGATCCATGAGCATATTCATTCATGCCAGTTTGGAAACTTCCTTGGAAATTGTCAGAAGG
AAAGAGAAGAGCTCAAGTTGAAGGAGAAGACTTATTCCCTGTGGCCATTTCTTTTGGAAGACCAAAAGAA
GTACTTAAATCCTCTCTACAGTTCCGAATCTCACAGATTTACAGTTTTGGAGCCAAATACAGTATCTTTC
AATTTTAAGTTTTGGAGGAACATGTACCATCAATTTGATCGAACACTGCATCCTAGGCAGTCTGTATTTA
ATATAATTATGAATATGAATGAGCAAAATAAACAATTAGAGAAAGATATTAAAGACCTAGAATCTAAAAT
TAAACAACGCAAAAATAAGCAAACAGATGGCATCCTCACCAAGGAATTGTTACATTCAGTTCATCCTGAA
TCACCTAACCTCAAAACTTCCCTGTGTTTTAAAGAGCAGACTCTGCTACCCGTAAATGATGCTCTTCGAA
CTATAGAGGGCAGCAGCCCGGCAGATAATCGTTATAGTGAATATGCAGAAGAGTTTTCTAAATCAGAACC
TGCTGTGGTCAGCTTAGAGTATGGTGTGGCAAGAATGACTTGTTAG

Translation (621 aa):
MEHIRTTKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQKETWILHHHIASVEKLALTTSGCPLVI
QCKNFRTVHFIVPRERDCHDIYNSLLQLSKQAKYEDLYAFSYNPKQNDSERLQGWQLIDLAEEYKRMGVP
NSHWQLSDANRDYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAAICRCSQPLSGF
SARCLEDEHLLQAISKANPVNRYMYVMDTRPKLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSS
LQKLLEVNGTKGLSVNDFYSGLESSGWLRHIKAVMDAAIFLAKAITVENASVLVHCSDGWDRTSQVCSLG
SLLLDSYYRTIKGFMVLIEKDWISFGHKFSERCGQLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFSEA
FLLQIHEHIHSCQFGNFLGNCQKEREELKLKEKTYSLWPFLLEDQKKYLNPLYSSESHRFTVLEPNTVSF
NFKFWRNMYHQFDRTLHPRQSVFNIIMNMNEQNKQLEKDIKDLESKIKQRKNKQTDGILTKELLHSVHPE
SPNLKTSLCFKEQTLLPVNDALRTIEGSSPADNRYSEYAEEFSKSEPAVVSLEYGVARMTC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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