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Report for CCDS87241.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87241.1 Public Homo sapiens 4 MAPK10 22 109 92 CCDS HistoryNCBI Gene:5602Re-query CCDS DB by CCDS ID:87241.1Re-query CCDS DB by GeneID:5602See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87241.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641208.1 ENSP00000492922.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641208.1Link to Ensembl Protein Viewer:ENSP00000492922.1Re-query CCDS DB by Nucleotide ID:ENST00000641208Re-query CCDS DB by Protein ID:ENSP00000492922
Original member Current member EBI ENST00000641120.1 ENSP00000493259.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641120.1Link to Ensembl Protein Viewer:ENSP00000493259.1Re-query CCDS DB by Nucleotide ID:ENST00000641120Re-query CCDS DB by Protein ID:ENSP00000493259
NCBI NM_001363657.1 NP_001350586.1 Updated not alive Link to Nucleotide Sequence:NM_001363657.1Link to Protein Sequence:NP_001350586.1Re-query CCDS DB by Nucleotide ID:NM_001363657Re-query CCDS DB by Protein ID:NP_001350586
NCBI NM_001363657.2 NP_001350586.1 Updated not alive Link to Nucleotide Sequence:NM_001363657.2Link to Protein Sequence:NP_001350586.1Re-query CCDS DB by Nucleotide ID:NM_001363657Re-query CCDS DB by Protein ID:NP_001350586
Current member NCBI NM_001363657.3 NP_001350586.1 Accepted alive Link to Nucleotide Sequence:NM_001363657.3Link to Protein Sequence:NP_001350586.1Re-query CCDS DB by Nucleotide ID:NM_001363657Re-query CCDS DB by Protein ID:NP_001350586Link to BLAST:NP_001350586.1

Chromosomal Locations for CCDS 87241.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 86017359 86017375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86029197 86029274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86031368 86031431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86064266 86064390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86067773 86067955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86089206 86089277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86101052 86101217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86101894 86102032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86103186 86103244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86107223 86107352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 86159298 86159419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1155 nt):
ATGAGCAAAAGCAAAGTTGACAACCAGTTCTACAGTGTGGAAGTGGGAGACTCAACCTTCACAGTTCTCA
AG
CGCTACCAGAATCTAAAGCCTATTGGCTCTGGGGCTCAGGGCATAGTTTGTGCCGCGTATGATGCTGT
C
CTTGACAGAAATGTGGCCATTAAGAAGCTCAGCAGACCCTTTCAGAACCAAACACATGCCAAGAGAGCG
TAC
CGGGAGCTGGTCCTCATGAAGTGTGTGAACCATAAAAACATTATTAGTTTATTAAATGTCTTCACAC
CC
CAGAAAACGCTGGAGGAGTTCCAAGATGTTTACTTAGTAATGGAACTGATGGATGCCAACTTATGTCA
A
GTGATTCAGATGGAATTAGACCATGAGCGAATGTCTTACCTGCTGTACCAAATGTTGTGTGGCATTAAG
CAC
CTCCATTCTGCTGGAATTATTCACAGGGATTTAAAACCAAGTAACATTGTAGTCAAGTCTGATTGCA
CA
TTGAAAATCCTGGACTTTGGACTGGCCAGGACAGCAGGCACAAGCTTCATGATGACTCCATATGTGGT
G
ACACGTTATTACAGAGCCCCTGAGGTCATCCTGGGGATGGGCTACAAGGAGAACGTTGACATGTGGTCA
GTA
GGGTGCATCATGGGAGAAATGATAAAAGGTGCAGTGCTGTTTCCTGGCACTGATCATATTGACCAGT
GG
AATAAGGTAATTGAACAACTAGGAACACCATGTCCAGAATTCATGAAGAAATTGCAACCCACAGTAAG
A
AACTATGTGGAGAATCGGCCCAAGTATGCGGGACTCACCTTCCCCAAACTCTTCCCAGATTCCCTCTTC
CCA
GCGGACTCCGAGCACAATAAACTCAAAGCCAGCCAAGCCAGGGACTTGTTGTCAAAGATGCTAGTGA
TT
GACCCAGCAAAAAGAATATCAGTGGACGACGCCTTACAGCATCCCTACATCAACGTCTGGTATGACCC
A
GCCGAAGTGGAGGCGCCTCCACCTCAGATATATGACAAGCAGTTGGATGAAAGAGAACACACAATTGAA
GAA
TGGAAAGAACTTATCTACAAGGAAGTAATGAATTCAGAAGAAAAGACTAAAAATGGTGTAGTAAAAG
GA
CAGCCTTCTCCTTCAGCACAGGTGCAGCAGTGA


Translation (384 aa):
MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA
Y
RELVLMKCVNHKN
IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK
H
LHSAGIIHR
DLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDMWS
V
GCIMGEMIKGAVLFPGTD
HIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLF
P
ADSEHNKLK
ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIE
E
WK
ELIYKEVMNSEEKTKNGVVKGQPSPSAQVQQ



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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