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Report for CCDS82492.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82492.1 Public Homo sapiens 2 SULT1C4 24 110 108 CCDS HistoryNCBI Gene:27233Re-query CCDS DB by CCDS ID:82492.1Re-query CCDS DB by GeneID:27233See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82492.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409309.3 ENSP00000387225.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409309.3Link to Ensembl Protein Viewer:ENSP00000387225.3Re-query CCDS DB by Nucleotide ID:ENST00000409309Re-query CCDS DB by Protein ID:ENSP00000387225
Original member Current member NCBI NM_001321770.2 NP_001308699.1 Accepted alive Link to Nucleotide Sequence:NM_001321770.2Link to Protein Sequence:NP_001308699.1Re-query CCDS DB by Nucleotide ID:NM_001321770Re-query CCDS DB by Protein ID:NP_001308699Link to BLAST:NP_001308699.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308699.1 227 O75897-2 227 100% 0 0

Chromosomal Locations for CCDS 82492.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 108378338 108378506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108381762 108381887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108383416 108383510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108386192 108386372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 108387320 108387432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (684 nt):
ATGGCCTTACACGACATGGAGGATTTTACATTTGATGGAACAAAGCGCTTAAGTGTCAACTACGTGAAGG
GAATTCTTCAACCGACAGACACCTGTGACATCTGGGATAAGATCTGGAACTTCCAAGCCAAGCCTGATGA
CCTGCTTATTTCTACCTATCCTAAAGCAGGAACAACATGGACTCAGGAGATAGTGGAATTAATACAAAAT
GAAGGTGATGTGGAGAAAAGTAAACGGGCACCGACTCATCAACGATTTCCTTTCCTCGAAATGAAAATCC
CATCCTTAGGATCTGTGTGCTGGGGCTCCTGGCATGAACATGTGAAAGGATGGTGGGAAGCCAAAGACAA
ACACCGTATTCTCTATCTCTTCTATGAGGACATGAAGAAGAACCCAAAGCATGAAATTCAGAAGCTGGCA
GAATTTATTGGGAAGAAATTAGATGACAAAGTTCTAGATAAAATTGTCCATTACACTTCGTTTGATGTCA
TGAAACAGAATCCAATGGCAAACTATTCATCGATTCCTGCTGAAATCATGGACCACTCCATTTCTCCATT
CATGAGAAAAGGGGCAGTGGGAGACTGGAAGAAACACTTCACCGTGGCTCAGAATGAGAGATTTGATGAA
GATTACAAGAAGAAAATGACTGATACCAGACTAACTTTCCACTTCCAGTTCTAG

Translation (227 aa):
MALHDMEDFTFDGTKRLSVNYVKGILQPTDTCDIWDKIWNFQAKPDDLLISTYPKAGTTWTQEIVELIQN
EGDVEKSKRAPTHQRFPFLEMKIPSLGSVCWGSWHEHVKGWWEAKDKHRILYLFYEDMKKNPKHEIQKLA
EFIGKKLDDKVLDKIVHYTSFDVMKQNPMANYSSIPAEIMDHSISPFMRKGAVGDWKKHFTVAQNERFDE
DYKKKMTDTRLTFHFQF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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