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Report for CCDS82174.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82174.1 Public Homo sapiens 17 TRIM37 24 110 108 CCDS HistoryNCBI Gene:4591Re-query CCDS DB by CCDS ID:82174.1Re-query CCDS DB by GeneID:4591See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82174.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393065.6 ENSP00000376784.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393065.6Link to Ensembl Protein Viewer:ENSP00000376784.2Re-query CCDS DB by Nucleotide ID:ENST00000393065Re-query CCDS DB by Protein ID:ENSP00000376784
Original member Current member NCBI NM_001320987.3 NP_001307916.1 Accepted alive Link to Nucleotide Sequence:NM_001320987.3Link to Protein Sequence:NP_001307916.1Re-query CCDS DB by Nucleotide ID:NM_001320987Re-query CCDS DB by Protein ID:NP_001307916Link to BLAST:NP_001307916.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307916.1 930 O94972-3 930 100% 0 0

Chromosomal Locations for CCDS 82174.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 58999377 58999459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59001598 59001714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59012328 59012446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59015610 59015799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59017296 59017424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59028415 59028723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59031896 59032090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59041813 59041898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59047683 59047819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59049178 59049393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59051214 59051328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59056875 59057054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59061032 59061108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59062567 59062648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59064355 59064405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59070823 59070947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59075647 59075714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59079754 59079877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59081097 59081219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59084002 59084089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59088291 59088407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59091300 59091340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 59106441 59106461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2793 nt):
ATGGATGAACAGAGCGTGGAGCGCTGGCTGACAGAGCAGAGAGCTCAATGTCCTCATTGCCGTGCTCCAC
TCCAGCTACGAGAACTAGTAAATTGTCGTTGGGCAGAAGAAGTAACACAACAGCTTGATACTCTTCAACT
CTGCAGTCTCACCAAACATGAAGAAAATGAAAAGGACAAATGTGAAAATCACCATGAAAAACTTAGTGTA
TTTTGCTGGACTTGTAAGAAGTGTATCTGCCATCAGTGTGCACTTTGGGGAGGAATGCATGGCGGACATA
CCTTTAAACCTTTGGCAGAAATTTATGAGCAACACGTCACTAAAGTGAATGAAGAGGTAGCCAAACTTCG
TCGGCGTCTCATGGAACTGATCAGCTTAGTTCAAGAAGTGGAAAGGAATGTAGAAGCTGTAAGAAATGCA
AAAGATGAGCGTGTTCGGGAAATTAGGAATGCAGTGGAGATGATGATTGCACGGTTAGACACACAGCTGA
AGAATAAGCTTATAACACTGATGGGTCAGAAGACATCTCTAACCCAAGAAACAGAGCTTTTGGAATCCTT
ACTTCAGGAGGTGGAGCACCAGTTGCGGTCTTGTAGTAAGAGTGAGTTGATATCTAAGAGCTCAGAGATC
CTTATGATGTTTCAGCAAGTTCATCGGAAGCCCATGGCATCTTTTGTTACCACTCCTGTTCCACCAGACT
TTACCAGTGAATTAGTGCCATCTTACGATTCAGCTACTTTTGTTTTAGAGAATTTCAGCACTTTGCGTCA
GAGAGCAGATCCTGTTTACAGTCCACCTCTTCAAGTTTCAGGACTTTGCTGGAGGTTAAAAGTTTACCCA
GATGGAAATGGAGTTGTGCGAGGTTACTACTTATCTGTGTTTCTGGAGCTCTCAGCTGGCTTGCCTGAAA
CTTCTAAATATGAATATCGTGTAGAGATGGTTCACCAGTCCTGTAATGATCCTACAAAAAATATCATTCG
AGAATTTGCATCTGACTTTGAAGTTGGAGAATGCTGGGGCTATAATAGATTTTTCCGTTTGGACTTACTC
GCAAATGAAGGATACTTGAATCCACAAAATGATACAGTGATTTTAAGGTTTCAGGTACGTTCACCAACTT
TCTTTCAAAAATCCCGGGACCAGCATTGGTACATTACTCAGTTGGAAGCTGCACAGACTAGTTATATCCA
ACAAATAAACAACCTTAAAGAGAGACTTACTATTGAGCTGTCTCGAACTCAGAAGTCAAGAGATTTGTCA
CCACCAGATAACCATCTTAGCCCCCAAAATGATGATGCTCTGGAGACACGAGCTAAGAAGTCTGCATGCT
CTGACATGCTTCTCGAAGGTGGTCCTACTACAGCTTCTGTAAGAGAGGCCAAAGAGGATGAAGAAGATGA
GGAGAAGATTCAGAATGAAGATTATCATCACGAGCTTTCAGATGGAGATCTGGATCTGGATCTTGTTTAT
GAGGATGAAGTAAATCAGCTCGATGGCAGCAGTTCCTCTGCTAGTTCCACAGCAACAAGTAATACAGAAG
AAAATGATATTGATGAAGAAACTATGTCTGGAGAAAATGATGTGGAATATAACAACATGGAATTAGAAGA
GGGAGAACTCATGGAAGATGCAGCTGCTGCAGGACCCGCAGGTAGTAGCCATGGTTATGTGGGTTCCAGT
AGTAGAATATCAAGAAGAACACATTTATGCTCCGCTGCTACCAGTAGTTTACTAGACATTGATCCATTAA
TTTTAATACATTTGTTGGACCTTAAGGACCGGAGCAGTATAGAAAATTTGTGGGGCTTACAGCCTCGCCC
ACCTGCTTCACTTCTGCAGCCCACAGCATCATATTCTCGAAAAGATAAAGACCAAAGGAAGCAACAGGCA
ATGTGGCGAGTGCCCTCTGATTTAAAGATGCTAAAAAGACTCAAAACTCAAATGGCCGAAGTTCGATGTA
TGAAAACTGATGTAAAGAATACACTTTCAGAAATAAAAAGCAGCAGTGCTGCTTCTGGAGACATGCAGAC
AAGCCTTTTTTCTGCTGACCAGGCAGCTCTGGCTGCATGTGGAACTGAAAACTCTGGCAGATTGCAGGAT
TTGGGAATGGAACTCCTGGCAAAGTCATCAGTTGCCAATTGTTACATACGAAACTCCACAAATAAGAAGA
GTAATTCGCCCAAGCCAGCTCGATCCAGTGTAGCAGGTAGTCTATCACTTCGAAGAGCAGTGGACCCTGG
AGAAAATAGTCGTTCAAAGGGAGACTGTCAGACTCTGTCTGAAGGCTCCCCAGGAAGCTCTCAGTCTGGG
AGCAGGCACAGTTCTCCCCGAGCCTTGATACATGGCAGTATCGGTGATATTCTGCCAAAAACTGAAGACC
GGCAGTGTAAAGCTTTGGATTCAGATGCTGTTGTGGTTGCAGTTTTCAGTGGCTTGCCTGCGGTTGAGAA
AAGGAGGAAAATGGTCACCTTGGGGGCTAATGCTAAAGGAGGTCATCTGGAAGGACTGCAGATGACTGAT
TTGGAAAATAATTCTGAAACTGGAGAGTTACAGCCTGTACTACCTGAAGGAGCTTCAGCTGCCCCTGAAG
AAGGAATGAGTAGCGACAGTGACATTGAATGTGACACTGAGAATGAGGAGCAGGAAGAGCATACCAGTGT
GGGCGGGTTTCACGACTCCTTCATGGTCATGACACAGCCCCCGGATGAAGATACACATTCCAGTTTTCCT
GATGGTGAACAAATAGGCCCTGAAGATCTCAGCTTCAATACAGATGAAAATAGTGGAAGGTAA

Translation (930 aa):
MDEQSVERWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSV
FCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNA
KDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEI
LMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWRLKVYP
DGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEVGECWGYNRFFRLDLL
ANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSYIQQINNLKERLTIELSRTQKSRDLS
PPDNHLSPQNDDALETRAKKSACSDMLLEGGPTTASVREAKEDEEDEEKIQNEDYHHELSDGDLDLDLVY
EDEVNQLDGSSSSASSTATSNTEENDIDEETMSGENDVEYNNMELEEGELMEDAAAAGPAGSSHGYVGSS
SRISRRTHLCSAATSSLLDIDPLILIHLLDLKDRSSIENLWGLQPRPPASLLQPTASYSRKDKDQRKQQA
MWRVPSDLKMLKRLKTQMAEVRCMKTDVKNTLSEIKSSSAASGDMQTSLFSADQAALAACGTENSGRLQD
LGMELLAKSSVANCYIRNSTNKKSNSPKPARSSVAGSLSLRRAVDPGENSRSKGDCQTLSEGSPGSSQSG
SRHSSPRALIHGSIGDILPKTEDRQCKALDSDAVVVAVFSGLPAVEKRRKMVTLGANAKGGHLEGLQMTD
LENNSETGELQPVLPEGASAAPEEGMSSDSDIECDTENEEQEEHTSVGGFHDSFMVMTQPPDEDTHSSFP
DGEQIGPEDLSFNTDENSGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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