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RefSeq
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Report for CCDS78288.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
78288.1 |
Public |
Homo sapiens |
7 |
IQCA1L |
24 |
110 |
108 |
          |
Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 78288.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
 |
 |
EBI |
ENST00000615129.4 |
ENSP00000482119.1 |
MANE Select |
Accepted |
alive |
      |
 |
 |
NCBI |
NM_001304419.2 |
NP_001291348.1 |
MANE Select |
Accepted |
alive |
        |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001291348.1 |
818 |
A6NCM1 |
818 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 78288.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2457 nt): ATGTCTGAGGGAGCTTACCAGCGCCTCTGGGAGTCCTCCCACGCGACCCTGCAGGAGCTGCTGGACCAAG AGCAGCTTCTGCTCGAACCTGCGCCCGACCGGGAGCGGCAGTCCTTCCAGTACAGGCTCGCATCGCTCTA CCTGCACTACCTGGGGCTGCTGCGCCGCTTCGACACCGTCTATGACCAGATGGTGCAGCCGCAGAAGCGG CGGCTGCTGCGACGCCTGCTGGACGGCGTGGCGGGCCGCGTGCTGGAGCTCAAGGACGAGCTGGTGCGCG CCGACCTGTGTGAGAACCACTGCCTGGACCGCGTGCTGCAGGATTTCAAGCTCACCCCAGCTGACCTGGA GGTTCCAATCCCCAAATACTTCCTGCTGGAGCAGTCCACCACTGTGCGGGAGCGAGGGCTGATACTGGCC GAGATCCTGTCCAGACTGGAGCCAGTGTCCTCCCAGAAGAGCTTTACAGGAATGCACCGGACTGAGGCCA TAATTCTAGTGCAAAAGGCAGAGCGGGCGAGGCAAGGCCGGCTTCGAGCCACCTTCATGCGAGAGATTCG AAGAGATGAGGAGCAGGATGGGAGGATTCGGGAGGATGGATGGCACAAGTTCAGTCAGGGCCAAGCAGCT GTCACCATACAGAAGGTGTGGAAAGGCTATCTGCAGAGGAAACGCACTCAGCAGGACCGGCGAATGGAGA TGGAGTTCATTGGCATGCTCCCCTCACCCAACCAGGTAGAGCACCTGAGCATCATCTCCCAGCCATGCCT CGTGGAGGATGTCCAGAGGCTCCGCCAGATGGAGAAAGAGGAGGAGTTCCGGGCAGCAATGGTGAAGGCC CATGATTCTCTGGTAGAGACAGAGGGGCCTGACATGAAGGAGAAAATGAAGGAGCAAATCCGACAGTGGT TTATCGAGTGCCATGACCTTACTGGCCGGTTCCCTGATTATCCAGATGCGTCTTCAGGTGGATCCTACTC AATCTTTGCAGACAAAACGCCAGAACAGGTGAGAATGGAACTGGAAATGCAGATGCAAGAGAACAGAAAA AAGGAACAAGAGAAGAGCAAGGAAAAAGGAAAGGATGAAAAAGAGAAGAAGAAAGGAAAGGAAGAAAAGG CCAAGAAGGGGGAAGTGGATGCGGTGTTGCAAGTGTTGCCATCCAAATGTATCCCTATGATCTGTGCCGG GCATGAAGAATACTTAAATACATGGAAGAACCGGTGTGAGAGCATACACCCCAGTCAGAATTATGACTCC GAGACCCTCCGGGAGGAGAAGAGGAAAGAGGTGGAGCTGGAGATCCGGATACAGGTGGATGAGCTGATGC GTCAGGAGCTGAGGAAGCTCCGTCTGGCTGTGGACAAGGAGGAAGAAAGACCCCTGAGGGCTCCAAAGAA AACACCTGGGAAGAAAACTGGGAAAAAGAAGGAAAAAGATCTGACCTCAGACAGGTCTGTGGAGTCTCTG TACGAAGAGCTTGTTATTTCTGGCCTTCTAAGGAAGAGTGAGTCAGTAGCATTGAAAGACTACATAGGTG ACTTCCTGTATCTTGGATCCACTCTGAGTTTGGTGAAGAAGTTGCCCATGCCATCCCTGTTTGACATACG ACAGAATGTGGCTTTGTATGCGGTCCTTCGGCTTGGCTCCCCGGATATCCACATCATGGCCCCACTCATC CGCTCCATCCTCCTGGTGGGCCCCTCTGGCATGGGGAAGAAGATGCTGGTCAAGGCAGTGTGCACAGAAA CTGGCGCCAACCTGTTCGACCTGTCGCCGGAAAACCTGCTGGGCAAATATCCTGGCAGGAATGGGGCACA GATGATGGTGCATATAGTCTTTAAGGTAGCCCGACTCCTACAGCCCTCTGTGATTTGGATTGGAAATGCT GAGAAGAATTTCTATAAGAAGACCCCCAAAGAAGACAAGGAGATGGACCCAAAGCGGATAAAGAAGGACC TCACCAAGGCCTTGCGGCTGCTGACTCCCGGAGACCGTGTGATGCTGATTGGGACAACCTCCCGGCCACA GCTGGCCGAGATGCGGGGTCTGTGCCGGGTCTACGAGCGGATCCTCTTCATGCCCCGGCCTGACTACGCA TCCCGCTATGTGCTCTGGAAGCGTATGATAGAGGCCCGGGGCATCCAGCCGACCCAGCACCTGGACATCA GTGCCCTAGCCAAGGTCTCCGATGGCTACACGCCGGGTCACATTCTCCAAGCCATCCAATCGGTGCTGAG TGAGCGGCGGTTCCTGCAACTGTCCAAGCGGCCCCTGGTGGCCTCTGAGTTCCTGGGACAACTGGTGAAG CTGGATCCAGTGTACAGGGAGGAGGAGGAGTCCCTGAAGGACTGGTACTTCAAGACCCCACTGGGCAAGA AGAGCATGAAACACAGGATGGACCAGTTGGAGGCCGAGGAGGCCAAGCTGGACAAGGAGAAGAAGAAAAG GAAGTGA
Translation (818 aa): MSEGAYQRLWESSHATLQELLDQEQLLLEPAPDRERQSFQYRLASLYLHYLGLLRRFDTVYDQMVQPQKR RLLRRLLDGVAGRVLELKDELVRADLCENHCLDRVLQDFKLTPADLEVPIPKYFLLEQSTTVRERGLILA EILSRLEPVSSQKSFTGMHRTEAIILVQKAERARQGRLRATFMREIRRDEEQDGRIREDGWHKFSQGQAA VTIQKVWKGYLQRKRTQQDRRMEMEFIGMLPSPNQVEHLSIISQPCLVEDVQRLRQMEKEEEFRAAMVKA HDSLVETEGPDMKEKMKEQIRQWFIECHDLTGRFPDYPDASSGGSYSIFADKTPEQVRMELEMQMQENRK KEQEKSKEKGKDEKEKKKGKEEKAKKGEVDAVLQVLPSKCIPMICAGHEEYLNTWKNRCESIHPSQNYDS ETLREEKRKEVELEIRIQVDELMRQELRKLRLAVDKEEERPLRAPKKTPGKKTGKKKEKDLTSDRSVESL YEELVISGLLRKSESVALKDYIGDFLYLGSTLSLVKKLPMPSLFDIRQNVALYAVLRLGSPDIHIMAPLI RSILLVGPSGMGKKMLVKAVCTETGANLFDLSPENLLGKYPGRNGAQMMVHIVFKVARLLQPSVIWIGNA EKNFYKKTPKEDKEMDPKRIKKDLTKALRLLTPGDRVMLIGTTSRPQLAEMRGLCRVYERILFMPRPDYA SRYVLWKRMIEARGIQPTQHLDISALAKVSDGYTPGHILQAIQSVLSERRFLQLSKRPLVASEFLGQLVK LDPVYREEEESLKDWYFKTPLGKKSMKHRMDQLEAEEAKLDKEKKKRK
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