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Report for CCDS7784.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7784.1 Public Homo sapiens 11 NLRP10 24 110 108 CCDS HistoryNCBI Gene:338322Re-query CCDS DB by CCDS ID:7784.1Re-query CCDS DB by GeneID:338322See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7784.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328600.3 ENSP00000327763.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000328600.3Link to Ensembl Protein Viewer:ENSP00000327763.2Re-query CCDS DB by Nucleotide ID:ENST00000328600Re-query CCDS DB by Protein ID:ENSP00000327763
Original member Current member EBI ENST00000691676.1 ENSP00000509542.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000691676.1Link to Ensembl Protein Viewer:ENSP00000509542.1Re-query CCDS DB by Nucleotide ID:ENST00000691676Re-query CCDS DB by Protein ID:ENSP00000509542
Original member Current member NCBI NM_001391958.1 NP_001378887.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001391958.1Link to Protein Sequence:NP_001378887.1Re-query CCDS DB by Nucleotide ID:NM_001391958Re-query CCDS DB by Protein ID:NP_001378887Link to BLAST:NP_001378887.1
Original member Current member NCBI NM_176821.4 NP_789791.1 Accepted alive Link to Nucleotide Sequence:NM_176821.4Link to Protein Sequence:NP_789791.1Re-query CCDS DB by Nucleotide ID:NM_176821Re-query CCDS DB by Protein ID:NP_789791Link to BLAST:NP_789791.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001378887.1 655 Q86W26 655 100% 0 0
NP_789791.1 655 Q86W26 655 100% 0 0

Chromosomal Locations for CCDS 7784.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 7959644 7961322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7963207 7963495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1968 nt):
ATGGCCATGGCCAAGGCCAGAAAGCCCCGGGAGGCATTGCTCTGGGCCTTGAGTGACCTTGAGGAGAACG
ATTTCAAGAAGTTAAAGTTCTACTTACGGGATATGACCCTGTCTGAGGGCCAGCCCCCACTGGCCAGAGG
GGAGTTGGAGGGCCTGATTCCGGTGGACCTGGCAGAATTACTGATTTCAAAGTATGGAGAAAAGGAGGCT
GTGAAAGTTGTCCTCAAGGGCTTGAAGGTCATGAACCTGTTGGAACTTGTGGACCAGCTCAGCCATATTT
GTCTGCATGATTACAGAGAAGTATACCGAGAGCATGTGCGCTGCCTAGAGGAATGGCAGGAAGCAGGAGT
CAATGGCAGATACAACCAGGTGCTCCTGGTGGCCAAGCCCAGCTCAGAGAGCCCAGAATCACTTGCCTGC
CCCTTCCCGGAGCAGGAGCTGGAGTCTGTCACGGTGGAGGCTCTATTTGATTCAGGGGAAAAGCCCTCAC
TGGCCCCATCCTTAGTTGTGCTACAGGGGTCGGCTGGCACTGGAAAGACAACTCTCGCCAGAAAAATGGT
GTTGGACTGGGCCACCGGTACTCTGTACCCAGGCCGGTTTGATTATGTCTTTTATGTAAGCTGCAAAGAA
GTGGTCCTGCTGCTGGAGAGCAAACTGGAGCAGCTCCTTTTCTGGTGCTGCGGGGACAATCAAGCCCCTG
TCACAGAGATTCTGAGGCAGCCAGAGCGGCTCCTGTTCATCCTGGATGGCTTTGATGAGCTGCAGAGGCC
CTTTGAAGAAAAGTTGAAGAAGAGGGGTTTGAGTCCCAAGGAGAGCCTGCTGCACCTTCTAATTAGGAGA
CATACACTCCCCACGTGCTCCCTTCTCATCACCACCCGGCCCCTGGCTTTGAGGAATCTGGAGCCCTTGC
TGAAACAAGCACGTCATGTCCATATCCTAGGCTTCTCTGAGGAGGAGAGGGCGAGGTACTTCAGCTCCTA
TTTCACGGATGAGAAGCAAGCTGACCGTGCCTTCGACATTGTACAGAAAAATGACATTCTCTACAAAGCG
TGTCAGGTTCCAGGCATTTGCTGGGTGGTCTGCTCCTGGCTGCAGGGGCAGATGGAGAGAGGCAAAGTTG
TCTTAGAGACACCTAGAAACAGCACTGACATCTTCATGGCTTACGTCTCCACCTTTCTGCCGCCCGATGA
TGATGGGGGCTGCTCCGAGCTTTCCCGGCACAGGGTCCTGAGGAGTCTGTGCTCCCTAGCAGCTGAAGGG
ATTCAGCACCAGAGGTTCCTATTTGAAGAAGCTGAGCTCAGGAAACATAATTTAGATGGCCCCAGGCTTG
CCGCTTTCCTGAGTAGTAACGACTACCAATTGGGACTTGCCATCAAGAAGTTCTACAGCTTCCGCCACAT
CAGCTTCCAGGACTTTTTTCATGCCATGTCTTACCTGGTGAAAGAGGACCAAAGCCGGCTGGGGAAGGAG
TCCCGCAGAGAAGTGCAAAGGCTGCTGGAGGTAAAGGAGCAGGAAGGGAATGATGAGATGACCCTCACTA
TGCAGTTTTTACTGGACATCTCGAAAAAAGACAGCTTCTCGAACTTGGAGCTCAAGTTCTGCTTCAGAAT
TTCTCCCTGTTTAGCGCAGGATCTGAAGCATTTTAAAGAACAGATGGAATCTATGAAGCACAACAGGACC
TGGGATTTGGAATTCTCCCTGTATGAAGCTAAAATAAAGAATCTGGTAAAAGGTATTCAGATGAACAATG
TATCATTCAAGATAAAACATTCAAATGAAAAGAAATCACAGAGCCAGAATTTATTTTCTGTCAAAAGCAG
CTTGAGTCATGGACCTAAGGAGGAGCAAAAATGTCCTTCTGTCCATGGACAGAAGGAGGGCAAAGATAAT
ATAGCAGGAACACAAAAGGAAGCTTCTACTGGAAAAGGCAGAGGGACAGAGGAAACACCAAAAAATACTT
ACATATAA

Translation (655 aa):
MAMAKARKPREALLWALSDLEENDFKKLKFYLRDMTLSEGQPPLARGELEGLIPVDLAELLISKYGEKEA
VKVVLKGLKVMNLLELVDQLSHICLHDYREVYREHVRCLEEWQEAGVNGRYNQVLLVAKPSSESPESLAC
PFPEQELESVTVEALFDSGEKPSLAPSLVVLQGSAGTGKTTLARKMVLDWATGTLYPGRFDYVFYVSCKE
VVLLLESKLEQLLFWCCGDNQAPVTEILRQPERLLFILDGFDELQRPFEEKLKKRGLSPKESLLHLLIRR
HTLPTCSLLITTRPLALRNLEPLLKQARHVHILGFSEEERARYFSSYFTDEKQADRAFDIVQKNDILYKA
CQVPGICWVVCSWLQGQMERGKVVLETPRNSTDIFMAYVSTFLPPDDDGGCSELSRHRVLRSLCSLAAEG
IQHQRFLFEEAELRKHNLDGPRLAAFLSSNDYQLGLAIKKFYSFRHISFQDFFHAMSYLVKEDQSRLGKE
SRREVQRLLEVKEQEGNDEMTLTMQFLLDISKKDSFSNLELKFCFRISPCLAQDLKHFKEQMESMKHNRT
WDLEFSLYEAKIKNLVKGIQMNNVSFKIKHSNEKKSQSQNLFSVKSSLSHGPKEEQKCPSVHGQKEGKDN
IAGTQKEASTGKGRGTEETPKNTYI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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