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Report for CCDS7294.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7294.1 Public Homo sapiens 10 TSPAN15 24 110 108 CCDS HistoryNCBI Gene:23555Re-query CCDS DB by CCDS ID:7294.1Re-query CCDS DB by GeneID:23555See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7294.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373290.7 ENSP00000362387.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373290.7Link to Ensembl Protein Viewer:ENSP00000362387.2Re-query CCDS DB by Nucleotide ID:ENST00000373290Re-query CCDS DB by Protein ID:ENSP00000362387
Original member Current member NCBI NM_012339.5 NP_036471.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012339.5Link to Protein Sequence:NP_036471.1Re-query CCDS DB by Nucleotide ID:NM_012339Re-query CCDS DB by Protein ID:NP_036471Link to BLAST:NP_036471.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036471.1 294 O95858 294 100% 0 0

Chromosomal Locations for CCDS 7294.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 69451595 69451690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69483691 69483876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69485141 69485215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69495594 69495689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69498280 69498396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69504438 69504485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69506124 69506240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 69506829 69506978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGCCGCGCGGGGACTCGGAGCAGGTGCGCTACTGCGCGCGCTTCTCCTACCTCTGGCTCAAGTTTTCAC
TTATCATCTATTCCACCGTGTTCTGGCTGATTGGGGCCCTGGTCCTGTCTGTGGGCATCTATGCAGAGGT
TGAGCGGCAGAAATATAAAACCCTTGAAAGTGCCTTCCTGGCTCCAGCCATCATCCTCATCCTCCTGGGC
GTCGTCATGTTCATGGTCTCCTTCATTGGTGTGCTGGCGTCCCTCCGTGACAACCTGTACCTTCTCCAAG
CATTCATGTACATCCTTGGGATCTGCCTCATCATGGAGCTCATTGGTGGCGTGGTGGCCTTGACCTTCCG
GAACCAGACCATTGACTTCCTGAACGACAACATTCGAAGAGGAATTGAGAACTACTATGATGATCTGGAC
TTCAAAAACATCATGGACTTTGTTCAGAAAAAGTTCAAGTGCTGTGGCGGGGAGGACTACCGAGATTGGA
GCAAGAATCAGTACCACGACTGCAGTGCCCCTGGACCCCTGGCCTGTGGGGTGCCCTACACCTGCTGCAT
CAGGAACACGACAGAAGTTGTCAACACCATGTGTGGCTACAAAACTATCGACAAGGAGCGTTTCAGTGTG
CAGGATGTCATCTACGTGCGGGGCTGCACCAACGCCGTGATCATCTGGTTCATGGACAACTACACCATCA
TGGCGGGCATCCTCCTGGGCATCCTGCTTCCCCAGTTCCTGGGGGTGCTGCTGACGCTGCTGTACATCAC
CCGGGTGGAGGACATCATCATGGAGCACTCTGTCACTGATGGGCTCCTGGGGCCCGGTGCCAAGCCCAGC
GTGGAGGCGGCAGGCACGGGATGCTGCTTGTGCTACCCCAATTAG

Translation (294 aa):
MPRGDSEQVRYCARFSYLWLKFSLIIYSTVFWLIGALVLSVGIYAEVERQKYKTLESAFLAPAIILILLG
VVMFMVSFIGVLASLRDNLYLLQAFMYILGICLIMELIGGVVALTFRNQTIDFLNDNIRRGIENYYDDLD
FKNIMDFVQKKFKCCGGEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTEVVNTMCGYKTIDKERFSV
QDVIYVRGCTNAVIIWFMDNYTIMAGILLGILLPQFLGVLLTLLYITRVEDIIMEHSVTDGLLGPGAKPS
VEAAGTGCCLCYPN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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