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Report for CCDS6875.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6875.1 Public Homo sapiens 9 TTC16 24 110 108 CCDS HistoryNCBI Gene:158248Re-query CCDS DB by CCDS ID:6875.1Re-query CCDS DB by GeneID:158248See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6875.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373289.4 ENSP00000362386.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373289.4Link to Ensembl Protein Viewer:ENSP00000362386.3Re-query CCDS DB by Nucleotide ID:ENST00000373289Re-query CCDS DB by Protein ID:ENSP00000362386
Original member Current member NCBI NM_144965.3 NP_659402.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144965.3Link to Protein Sequence:NP_659402.1Re-query CCDS DB by Nucleotide ID:NM_144965Re-query CCDS DB by Protein ID:NP_659402Link to BLAST:NP_659402.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659402.1 873 Q8NEE8-1 873 100% 0 0

Chromosomal Locations for CCDS 6875.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 127716146 127716163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127716844 127717016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127717334 127717424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127717629 127717772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127720078 127720178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127720266 127720395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127723119 127723333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127724120 127724364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127724756 127724897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127726239 127726404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127726970 127727112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127727270 127727465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127729581 127729668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127730636 127731405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2622 nt):
ATGACAGATTCGGACGAGGATGCCCTGAAGGTTGACCAGGGCCCCTCACGGGACATCCCAAAGCCATGGG
TGATTCCAGCCCCCAAAGGGATCCTGCAGCACATCTTTGGGACCAGCCACGTGTTCCAAAGCATCTGTGA
TGTAAAACCAAAGGTCACAGGGTTAACAGTGCCCCTCAAAGTCAGGGAATACTACTCCAGAGGCCAGCAG
TGCTTGGAGCAGGCAGACTGGGAGACAGCTGTGCTGCTCTTCTCCCGCGCACTCCACCTGGACCCACAGC
TGGTGGACTTCTATGCCTTACGGGCTGAGGCCTACCTCCAGCTCTGTGACTTCTCCTCGGCCGCCCAGAA
CCTGCGAAGGGCCTACTCATTACAGCAGGACAACTGCAAGCACCTGGAGCGCCTCACCTTTGTGCTCTAC
CTACAGGGACAATGCCTTTTTGAGCAGTGTGCCTTCCTGGATGCCCTGAATGTCTTCTCACATGCTGCTG
AGCTCCAGCCTGAGAAACCATGCTTCCGTTACCGATGCATGGCCTGTCTCCTGGCCCTCAAGCAGCATCA
GGCCTGCCTCACGCTCATCACCAACGAGCTGAAGCAGGACACCACCAACGCCGATGTCTACATCTTCCGG
GCCAGACTCTACAACTTTCTCCAGAAGCCCCACCTCTGCTACCGGGACCTGCACAGCGCCTTGCTGTTGA
ATCCCAAGCACCCGCAGGCCAGGATGCTGCTCCAGAAGATGGTGGCCCAGGCCCAGCAGGCGCGCCAAGA
TGCGGGGATCCTGGCTGTGCAGGGCAAGCTGCAGCACGCACTGCAGCGGATCAACCGTGCCATCGAGAAC
AACCCTCTGGACCCCAGTCTCTTCCTCTTCCGGGGCACCATGTACCGACGGCTCCAGGAGTTCGATGGGG
CAGTGGAGGACTTCCTGAAGGTGCTGGACATGGTGACCGAGGACCAGGAGGACATGGTGCGGCAGGCACA
GCGCCAGCTGTTGCTGACCTACAACGACTTTGCCGTGCACTGCTACAGGCAGGGCGCCTACCAGGAGGGC
GTGCTGCTGCTGAACAAGGCCCTCCGGGACGAGCAGCAGGAGAAAGGACTCTACATCAACCGAGGCGATT
GCTTCTTCCAGCTGGGCAACCTGGCCTTTGCCGAGGCGGACTACCAGCAGGCGCTGGCGCTGAGCCCTCA
GGACGAGGGCGCCAACACGCGCATGGGCCTGCTGCAGGAGAAGATGGGCTTCTGCGAGCAGAGGCGCAAG
CAGTTCCAGAAGGCAGAGAACCACTTCTCCACGGCCATCCGGCACAACCCCCAGAAGGCCCAGTACTACC
TGTACCGGGCCAAGAGCCGGCAGCTGCTGCAGAACATTTTTGGGGCCCGCCAGGATGTGGCCACTGTCCT
GCTCCTCAACCCCAAGCAACCAAAGCTGTCCCTGCTGATGACCAACCTCTTCCCGGGCATGTCGGTGGAG
GAGGTGCTTAGCACCCAGATAGCCCACCTGGCCAGGCTGCAGCTGGAGCAGATGGTGGAGGGCAGCCTGC
AGGCCGGCAGCCCACAAGGCATTGTGGGGATGCTTAAACGGCACGAGTTGGAGCGCCAGAAGGCCTTGGC
CCTGCAGCACTCATGGAAGCAGGGGGAGCCTTTGATTGCGACCTCCGAGGAGCTGAAGGCCACCCCTGAG
ATTCCGCAGGTAAAACCGGGAAGCTCAGAGGGAGAGGCTGAGGCCCCTGAGGAGGAGGAAGAAAAGGAGA
AGGAGAAAAAAGAGGAGAAAAAATCAGAGCTCATACCTAGCAAGGTGGCGTCCCTGTCTGACAGCTACCT
TGACCAGACCTCTTCAGCCTCCAGCATGAGCTTCAGGACCACAGGCACCTCAGAGACTGAGATGTCGGCT
ATCTGCCAGGAATACAGGAGCACCTCAGCCACCGCCGTGACATTCTCTGACTCGTCACTGTTGAAGACGC
AATCCTCGGACTCTGGGAACAACAGGGAGGCACTAAGCCATGGTCCCAGAAAAATCAAGGCCACCCAGGG
CCAGAGGCAGAGCCTTAGCAAGACTGAGCCCACCCAGAGCCAGAGGCGGAACTCCAGCAAGACCAAGGCC
ACTATACACAAGAGGAACTCCAGCAAGACCAAGGCCACCCAAAGCCAGAGGCGGAACTCCAGCAAGACCA
GGGCCACCCAGGGCCAGGGGCAGAGCTCCAGCAAGACTGAGGCCACTCAGGGCCAGAGGCAGAGCTCCAG
CGAGATTGAGGCCACCCAGGGCCCAAGGCAGGAGCCCAGCAAGACCAAGACCACCCGGAGCCCAAGGCAG
AGGCCCAGAAAGGTCAAGGCTGCTCGTGGCCGGAGCTGGAGACCCAGCAAGGTTGATGCCACCCAGGGCC
GAAGCAGGGGACTGCTCCGAAGTTCCACCAAGACTGAGGCTTTCTATGACTCAAACTGGAGCCTCAGCAA
AACTGAGTATGCCCAAGGCCAGGGCCAGAGGTCCAGCAAGGCTGAGGGTGCCCAGGGCAAGAGCCAGGGC
ATGAGCTCAACTTCCAGCAAGGCCGAGTCCACCTGGGGACCCAGCCCAAGTCTCAGCAAAACTGAGGTTG
ATCAGGACCTCACCTACTATGAAGCTGTCTGA

Translation (873 aa):
MTDSDEDALKVDQGPSRDIPKPWVIPAPKGILQHIFGTSHVFQSICDVKPKVTGLTVPLKVREYYSRGQQ
CLEQADWETAVLLFSRALHLDPQLVDFYALRAEAYLQLCDFSSAAQNLRRAYSLQQDNCKHLERLTFVLY
LQGQCLFEQCAFLDALNVFSHAAELQPEKPCFRYRCMACLLALKQHQACLTLITNELKQDTTNADVYIFR
ARLYNFLQKPHLCYRDLHSALLLNPKHPQARMLLQKMVAQAQQARQDAGILAVQGKLQHALQRINRAIEN
NPLDPSLFLFRGTMYRRLQEFDGAVEDFLKVLDMVTEDQEDMVRQAQRQLLLTYNDFAVHCYRQGAYQEG
VLLLNKALRDEQQEKGLYINRGDCFFQLGNLAFAEADYQQALALSPQDEGANTRMGLLQEKMGFCEQRRK
QFQKAENHFSTAIRHNPQKAQYYLYRAKSRQLLQNIFGARQDVATVLLLNPKQPKLSLLMTNLFPGMSVE
EVLSTQIAHLARLQLEQMVEGSLQAGSPQGIVGMLKRHELERQKALALQHSWKQGEPLIATSEELKATPE
IPQVKPGSSEGEAEAPEEEEEKEKEKKEEKKSELIPSKVASLSDSYLDQTSSASSMSFRTTGTSETEMSA
ICQEYRSTSATAVTFSDSSLLKTQSSDSGNNREALSHGPRKIKATQGQRQSLSKTEPTQSQRRNSSKTKA
TIHKRNSSKTKATQSQRRNSSKTRATQGQGQSSSKTEATQGQRQSSSEIEATQGPRQEPSKTKTTRSPRQ
RPRKVKAARGRSWRPSKVDATQGRSRGLLRSSTKTEAFYDSNWSLSKTEYAQGQGQRSSKAEGAQGKSQG
MSSTSSKAESTWGPSPSLSKTEVDQDLTYYEAV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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