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Report for CCDS6569.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6569.1 Public Homo sapiens 9 CCL27 24 110 108 CCDS HistoryNCBI Gene:10850Re-query CCDS DB by CCDS ID:6569.1Re-query CCDS DB by GeneID:10850See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6569.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000259631.5 ENSP00000259631.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000259631.5Link to Ensembl Protein Viewer:ENSP00000259631.4Re-query CCDS DB by Nucleotide ID:ENST00000259631Re-query CCDS DB by Protein ID:ENSP00000259631
Original member Current member NCBI NM_006664.4 NP_006655.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006664.4Link to Protein Sequence:NP_006655.1Re-query CCDS DB by Nucleotide ID:NM_006664Re-query CCDS DB by Protein ID:NP_006655Link to BLAST:NP_006655.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006655.1 112 Q9Y4X3 112 100% 0 0

Chromosomal Locations for CCDS 6569.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 34661944 34662079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34662284 34662416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34662564 34662633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGAAGGGGCCCCCAACCTTCTGCAGCCTCCTGCTGCTGTCATTGCTCCTGAGCCCAGACCCTACAGCAG
CATTCCTACTGCCACCCAGCACTGCCTGCTGTACTCAGCTCTACCGAAAGCCACTCTCAGACAAGCTACT
GAGGAAGGTCATCCAGGTGGAACTGCAGGAGGCTGACGGGGACTGTCACCTCCAGGCTTTCGTGCTTCAC
CTGGCTCAACGCAGCATCTGCATCCACCCCCAGAACCCCAGCCTGTCACAGTGGTTTGAGCACCAAGAGA
GAAAGCTCCATGGGACTCTGCCCAAGCTGAATTTTGGGATGCTAAGGAAAATGGGCTGA

Translation (112 aa):
MKGPPTFCSLLLLSLLLSPDPTAAFLLPPSTACCTQLYRKPLSDKLLRKVIQVELQEADGDCHLQAFVLH
LAQRSICIHPQNPSLSQWFEHQERKLHGTLPKLNFGMLRKMG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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