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Report for CCDS6074.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6074.1 Public Homo sapiens 8 SARAF 24 110 108 CCDS HistoryNCBI Gene:51669Re-query CCDS DB by CCDS ID:6074.1Re-query CCDS DB by GeneID:51669See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6074.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256255.11 ENSP00000256255.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256255.11Link to Ensembl Protein Viewer:ENSP00000256255.6Re-query CCDS DB by Nucleotide ID:ENST00000256255Re-query CCDS DB by Protein ID:ENSP00000256255
Original member Current member NCBI NM_016127.6 NP_057211.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016127.6Link to Protein Sequence:NP_057211.4Re-query CCDS DB by Nucleotide ID:NM_016127Re-query CCDS DB by Protein ID:NP_057211Link to BLAST:NP_057211.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057211.4 339 Q96BY9-1 339 100% 0 0

Chromosomal Locations for CCDS 6074.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 30063888 30063913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30065988 30066139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30066777 30066918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30069642 30070059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30073877 30074055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 30082847 30082949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1020 nt):
ATGGCCGCAGCCTGCGGGCCGGGAGCGGCCGGGTACTGCTTGCTCCTCGGCTTGCATTTGTTTCTGCTGA
CCGCGGGCCCTGCCCTGGGCTGGAACGACCCTGACAGAATGTTGCTGCGGGATGTAAAAGCTCTTACCCT
CCACTATGACCGCTATACCACCTCCCGCAGGCTGGATCCCATCCCACAGTTGAAATGTGTTGGAGGCACA
GCTGGTTGTGATTCTTATACCCCAAAAGTCATACAGTGTCAGAACAAAGGCTGGGATGGGTATGATGTAC
AGTGGGAATGTAAGACGGACTTAGATATTGCATACAAATTTGGAAAAACTGTGGTGAGCTGTGAAGGCTA
TGAGTCCTCTGAAGACCAGTATGTACTAAGAGGTTCTTGTGGCTTGGAGTATAATTTAGATTATACAGAA
CTTGGCCTGCAGAAACTGAAGGAGTCTGGAAAGCAGCACGGCTTTGCCTCTTTCTCTGATTATTATTATA
AGTGGTCCTCGGCGGATTCCTGTAACATGAGTGGATTGATTACCATTGTGGTACTCCTTGGGATCGCGTT
TGTAGTCTATAAGCTGTTCCTGAGTGACGGGCAGTATTCTCCTCCACCGTACTCTGAGTATCCTCCATTT
TCCCACCGTTACCAGAGATTCACCAACTCAGCAGGACCTCCTCCCCCAGGCTTTAAGTCTGAGTTCACAG
GACCACAGAATACTGGCCATGGTGCAACTTCTGGTTTTGGCAGTGCTTTTACAGGACAACAAGGATATGA
AAATTCAGGACCAGGGTTCTGGACAGGCTTGGGAACTGGTGGAATACTAGGATATTTGTTTGGCAGCAAT
AGAGCGGCAACACCCTTCTCAGACTCGTGGTACTACCCGTCCTATCCTCCCTCCTACCCTGGCACGTGGA
ATAGGGCTTACTCACCCCTTCATGGAGGCTCGGGCAGCTATTCGGTATGTTCAAACTCAGACACGAAAAC
CAGAACTGCATCAGGATATGGTGGTACCAGGAGACGATAA

Translation (339 aa):
MAAACGPGAAGYCLLLGLHLFLLTAGPALGWNDPDRMLLRDVKALTLHYDRYTTSRRLDPIPQLKCVGGT
AGCDSYTPKVIQCQNKGWDGYDVQWECKTDLDIAYKFGKTVVSCEGYESSEDQYVLRGSCGLEYNLDYTE
LGLQKLKESGKQHGFASFSDYYYKWSSADSCNMSGLITIVVLLGIAFVVYKLFLSDGQYSPPPYSEYPPF
SHRYQRFTNSAGPPPPGFKSEFTGPQNTGHGATSGFGSAFTGQQGYENSGPGFWTGLGTGGILGYLFGSN
RAATPFSDSWYYPSYPPSYPGTWNRAYSPLHGGSGSYSVCSNSDTKTRTASGYGGTRRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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