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Report for CCDS59431.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59431.1 Public Homo sapiens 2 POTEI 24 110 108 CCDS HistoryNCBI Gene:653269Re-query CCDS DB by CCDS ID:59431.1Re-query CCDS DB by GeneID:653269See the combined annotation on chromosome 2 in Sequence Viewer

Public Note for CCDS 59431.1
This CCDS representation lacks full-length human transcript support and it is therefore inferred, but the full-length exon combination it is supported by partial human transcripts and the full-length paralogous transcript EF523384.1.

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 59431.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451531.7 ENSP00000392718.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451531.7Link to Ensembl Protein Viewer:ENSP00000392718.2Re-query CCDS DB by Nucleotide ID:ENST00000451531Re-query CCDS DB by Protein ID:ENSP00000392718
Original member Current member NCBI NM_001277406.2 NP_001264335.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001277406.2Link to Protein Sequence:NP_001264335.1Re-query CCDS DB by Nucleotide ID:NM_001277406Re-query CCDS DB by Protein ID:NP_001264335Link to BLAST:NP_001264335.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001264335.1 1075 P0CG38 1075 100% 0 0

Chromosomal Locations for CCDS 59431.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 130462816 130464144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130465652 130465772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130474378 130474559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130474907 130474951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130476631 130476701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130482003 130482073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130488032 130488198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130489235 130489279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130490670 130490740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130496552 130496622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130499084 130499221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130500536 130500642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130503446 130503619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130503780 130503894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 130508715 130509235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3228 nt):
ATGGTAGCTGAGGTTGATTCAATGCCGGCTGCCTCTTCTGTGAAGAAGCCATTTGTTCTCAGGAGCAAGA
TGGGCAAGTGGTGCCGCCACTGCTTCCCCTGCTGCAGGGGGAGCGGCAAGAGCAACGTGGGCACTTCTGG
AGACCAGGACGACTCCACTATGAAGACACTCAGGAGCAAGATGGGCAAGTGGTGCTGCCACTGCTTCCCC
TGCTGCAGGGGGAGTGGCAAGAGCAACGTGGGCACTTCTGGAGACCACGACGACTCCGCTATGAAGACGC
TCAGGAGCAAGATGGGCAAGTGGTGCTGCCACTGCTTCCCCTGCTGCAGGGGGAGCGGCAAGAGCAACGT
GGGTGCTTGGGGAGACTACGACGACAGCGCCTTCGTGGAGCCGAGATACCACGTCCGTCGAGAAGATCTG
GACAAGCTCCACAGAGCTGCCTGGTGGGGTAAAGTCGCCAGAAAGGATCTGATCGTCATGCTCAGGGACA
CTGACGTGAACAAGCAGGACAAGCAAAAGAGGACTGCTCTACATCTGGCCTCTGCCAATGGGAATTCAGG
AGTAGTAAAACTCCTGCTGGACAGACGATGTCAACTTAATGTCCTTGACAACAAAAAGAGGACAGCTCTG
ACAAAGGCCGTACAATGCCAGGAAGATGAATGTGCGTTAATGTTGCTGGAACATGGCACTGATCCAAACA
TTCCAGATGAGTATGGAAATACCACTCTACACTACGCTATCTACAATGAAGATAAATTAATGGCCAAAGC
ACTGCTCTTATACGGTGCTGATATCGAATCAAAAAACAAGCATGGCCTCACACCACTGCTACTTGGTGTA
CATGAGCAAAAACAGCAAGTGGTGAAATTTTTAATCAAGAAAAAAGCGAATTTAAATGCGCTGGATAGAT
ATGGAAGAACTGCTCTCATACTTGCTGTATGTTGTGGATCAGCAAGTATAGTCAGCCTTCTACTTGAGCA
AAATATTGATGTATCTTCTCAAGATCTATCTGGACAGACGGCCAGAGAGTATGCTGTTTCTAGTCATCAT
CATGTAATTTGCCAGTTACTTTCTGACTACAAAGAAAAACAGATGCTAAAAATCTCTTCTGAAAACAGCA
ATCCAGAACAAGACTTAAAGCTGACATCAGAGGAAGAGTCACAAAGGTTCAAAGGCAGTGAAAATAGCCA
GCCAGAGAAAATGTCTCAAGAACCAGAAATAAATAAGGATGGTGATAGAGAGGTTGAAGAAGAAATGAAG
AAGCATGAAAGTAATAATGTGGGATTACTAGAAAACCTGAGTAATGGTGTCACTGCTGGCAATGGTGATG
ATGGATTAATTCCTCAAAGGAAGAGCAGAACACCTGAAAATCAGCAATTTCCTGACAACGAAAGTGAAGA
GTATCACAGAATTTGCGAATTAGTTTCTGACTACAAAGAAAAACAGATGCCAAAATACTCTTCTGAAAAC
AGCAACCCAGAACAAGACTTAAAGCTGACATCAGAGGAAGAGTCACAAAGGCTTAAAGGCAGTGAAAATG
GCCAGCCAGAGAAAAGATCTCAAGAACCAGAAATAAATAAGGATGGTGATAGAGAGCTAGAAAATTTTAT
GGCTATCGAAGAAATGAAGAAGCACGGAAGTACTCACGTCGGATTCCCAGAAAACCTGACTAATGGTGCC
ACTGCTGGCAATGGTGATGATGGATTAATTCCTCCAAGGAAGAGCAGAACACCTGAAAGCCAGCAATTTC
CTGACACTGAGAATGAAGAGTATCACAGTGACGAACAAAATGATACTCAGAAGCAATTTTGTGAAGAACA
GAACACTGGAATATTACACGATGAGATTCTGATTCATGAAGAAAAGCAGATAGAAGTGGTTGAAAAAATG
AATTCTGAGCTTTCTCTTAGTTGTAAGAAAGAAAAAGACTTCTTGCATGAAAATAGTACGTTGCGGGAAG
AAATTGCCATGCTAAGACTGGAGCTAGACACAATGAAACATCAGAGCCAGCTAAGAAAAAAGAAATATTT
GGAGGATATTGAAAGTGTGAAAAAAAAGAATGATAATCTTTTAAAGGCTCTACAATTGAATGAGCTCACC
ATGGATGATGATACCGCCGTGCTCGTCATTGACAACGGCTCTGGCATGTGCAAGGCCGGCTTTGCGGGCG
ACGATGCCCCCCGGGCTGTCTTCCCTTCCATCGTGGGGCGCCCCAGGCAGCAGGGCATGATGGGGGGCAT
GCATCAGAAAGAGTCCTATGTGGGCAAGGAGGCCCAGAGCAAGAGAGGCATCCTGACCCTGAAGTACCCC
ATGGAACACGGCATCATCACCAACTGGGATGACATGGAGAAGATCTGGCACCACACCTTCTACAACGAGC
TGCGTGTGGCCCCTGAGGAGCACCCCATCCTGCTGACCGAGGCCCCCCTGAACCCCAAGGCCAACCGCGA
GAAGATGACCCAGATCATGTTTGAGACCTTCAACACCCCAGCCATGTACGTGGCCATCCAGGCCATGCTG
TCCCTGTACACCTCTGGCCGTACTACTGGCATCGTGATGGACTCTGGTGACGGGGTCACCCACACTGTGC
CCATCTATGATGGGAATGCCCTCCCCCATGCCACCCTGCGCCTAGACCTGGCTGGGCGGGAACTGACTGA
CTACCTCATGAAGATCCTCACCGAGCGTGGCTATAGGTTCACCACCATGGCCGAGCGGGAAATCGTGCGT
GACATCAAAGAGAAGCTGTGCTATGTTGCCCTGGACTTCGAGCAGGAGATGGCCATGGCGGCCTCCAGCT
CCTCCCTAGAGAAGAGCTACGAGCTGCCCGATGGCCAGGTCATCACCATCGGCAACGAGTGGTTCCGCTG
CCCCGAGGCGCTCTTCCAGCCTTGCTTCCTGGGCATGGAATCCTGTGGCATCCATGAAACTACCTTCAAC
TCCATCATGAAGTCTGATGTGGACATCCGCAAAGACCTGTACACCAACACAGTGCTGTCTGGCGGCACCA
CCATGTACCCTGGCATGGCCCACAGAATGCAGAAGGAGATCGCTGCCCTGGCGCCTAGCATGTTGAAGAT
CAGGATCATTGCTCCTCCCAAGCGCAAGTACTCCGTGTGGGTCGGTGGCTCCATCCTGGCCTCGCTGTCC
ACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGATGAGTCAGGCCCCTCCATTGTCCACCGCAAAT
GCTTCTAG

Translation (1075 aa):
MVAEVDSMPAASSVKKPFVLRSKMGKWCRHCFPCCRGSGKSNVGTSGDQDDSTMKTLRSKMGKWCCHCFP
CCRGSGKSNVGTSGDHDDSAMKTLRSKMGKWCCHCFPCCRGSGKSNVGAWGDYDDSAFVEPRYHVRREDL
DKLHRAAWWGKVARKDLIVMLRDTDVNKQDKQKRTALHLASANGNSGVVKLLLDRRCQLNVLDNKKRTAL
TKAVQCQEDECALMLLEHGTDPNIPDEYGNTTLHYAIYNEDKLMAKALLLYGADIESKNKHGLTPLLLGV
HEQKQQVVKFLIKKKANLNALDRYGRTALILAVCCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSSHH
HVICQLLSDYKEKQMLKISSENSNPEQDLKLTSEEESQRFKGSENSQPEKMSQEPEINKDGDREVEEEMK
KHESNNVGLLENLSNGVTAGNGDDGLIPQRKSRTPENQQFPDNESEEYHRICELVSDYKEKQMPKYSSEN
SNPEQDLKLTSEEESQRLKGSENGQPEKRSQEPEINKDGDRELENFMAIEEMKKHGSTHVGFPENLTNGA
TAGNGDDGLIPPRKSRTPESQQFPDTENEEYHSDEQNDTQKQFCEEQNTGILHDEILIHEEKQIEVVEKM
NSELSLSCKKEKDFLHENSTLREEIAMLRLELDTMKHQSQLRKKKYLEDIESVKKKNDNLLKALQLNELT
MDDDTAVLVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRQQGMMGGMHQKESYVGKEAQSKRGILTLKYP
MEHGIITNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAML
SLYTSGRTTGIVMDSGDGVTHTVPIYDGNALPHATLRLDLAGRELTDYLMKILTERGYRFTTMAEREIVR
DIKEKLCYVALDFEQEMAMAASSSSLEKSYELPDGQVITIGNEWFRCPEALFQPCFLGMESCGIHETTFN
SIMKSDVDIRKDLYTNTVLSGGTTMYPGMAHRMQKEIAALAPSMLKIRIIAPPKRKYSVWVGGSILASLS
TFQQMWISKQEYDESGPSIVHRKCF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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