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Report for CCDS58995.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58995.1 Public Homo sapiens 6 TBC1D7 24 110 108 CCDS HistoryNCBI Gene:51256Re-query CCDS DB by CCDS ID:58995.1Re-query CCDS DB by GeneID:51256See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 58995.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343141.8 ENSP00000343100.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000343141.8Link to Ensembl Protein Viewer:ENSP00000343100.4Re-query CCDS DB by Nucleotide ID:ENST00000343141Re-query CCDS DB by Protein ID:ENSP00000343100
Original member Current member NCBI NM_001258457.3 NP_001245386.1 Accepted alive Link to Nucleotide Sequence:NM_001258457.3Link to Protein Sequence:NP_001245386.1Re-query CCDS DB by Nucleotide ID:NM_001258457Re-query CCDS DB by Protein ID:NP_001245386Link to BLAST:NP_001245386.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245386.1 247 Q9P0N9-4 247 100% 0 0

Chromosomal Locations for CCDS 58995.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 13305101 13305187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13306398 13306527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13307600 13307745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13320908 13321095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13325094 13325174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 13326787 13326898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (744 nt):
ATGACTGAGGACTCTCAGAGAAACTTTCGTTCAGTATATTATGAGAAAGTGGGGTTTCGTGGAGTTGAAG
AA
AAGAAATCATTAGAAATTCTCCTAAAAGATGACCGTCTGGATACTGAGAAACTTTGTACTTTTAGTCA
G
AGGTTCCCTCTCCCGTCCATGTACCGTGCATTGGTATGGAAGGTGCTTCTAGGAATCTTGCCTCCACAC
CAC
GAGTCCCATGCCAAGGTGATGATGTATCGTAAGGAGCAGTACTTGGATGTCCTTCATGCCCTGAAAG
TC
GTTCGCTTTGTTAGTGATGCCACACCTCAGGCTGAAGTCTATCTCCGCATGTATCAGCTGGAGTCTGG
G
AAGTTACCTCGAAGTCCCTCTTTTCCACTGCCAAAAGCGTTTGAACAATACTTGAATCTGGAAGATGGC
AGA
CTGCTGACTCATCTGAGGATGTGTTCCGCGGCGCCCAAACTTCCTTATGATCTCTGGTTCAAGAGGT
GC
TTTGCGGGATGTTTGCCTGAATCCAGTTTACAGAGGGTTTGGGATAAAGTTGTGAGTGGATCCTGTAA
G
ATCCTAGTTTTTGTAGCTGTCGAAATTTTATTAACCTTTAAAATAAAAGTTATGGCACTGAACAGTGCA
GAG
AAGATAACAAAGTTTCTGGAAAATATTCCCCAGGACAGCTCAGACGCGATCGTGAGCAAGGCCATTG
AC
TTGTGGCACAAACACTGTGGGACCCCGGTCCATTCAAGCTGA


Translation (247 aa):
MTEDSQRNFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVWKVLLGILPPH
H
ESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLRMYQLESGKLPRSPSFPL
PKAFEQYLNLEDG
R
LLTHLRMCSAAPKLPYDLWFKRCFAGCLPESSLQ
RVWDKVVSGSCKILVFVAVEILLTFKIKVMALNSA
E
KITKFLEN
IPQDSSDAIVSKAIDLWHKHCGTPVHSS



Links Key
 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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