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Report for CCDS57173.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
57173.1 |
Public |
Mus musculus |
2 |
Slc4a10 |
23 |
108 |
98 |
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Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 57173.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000054484.14 |
ENSMUSP00000061411.8 |
Accepted |
alive |
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NCBI |
NM_001242379.1 |
NP_001229308.1 |
Updated |
not alive |
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NCBI |
NM_001242379.2 |
NP_001229308.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001229308.1 |
1106 |
Q5DTL9-3 |
1106 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 57173.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3321 nt): ATGGAGATTAAAGACCAGGGAGCCCAAATGGAGCCGCTGCTGCCTACGAGAAATGATGAAGAAGCCGTTG TGGATAGAGGTGGAACACGCTCTATTCTCAAAACACATTTTGAGAAAGAAGATTTAGAAGGTCATCGGAC ATTATTTATTGGAGTTCATGTGCCCCTGGGTGGAAGAAAAAGCCATCGTCGTCACAGGCATCGTGGTCAT AAGCACAGAAAGAGGGACAGAGAGAGAGATTCGGGACTGGAGGATGGAAGAGAGTCCCCTTCTTTTGACA CCCCATCGCAGAGGGTGCAGTTTATTCTTGGAACTGAGGACGATGATGAGGAGCACCTCCCTCATGACCT TTTCACAGAGCTGGATGAGATTTGCTGGCGTGAAGGGGAAGATGCTGAGTGGCGAGAGACAGCCAGGTGG TTGAAATTTGAAGAGGATGTGGAAGATGGAGGAGAAAGATGGAGTAAGCCCTATGTGGCCACGCTTTCAT TACACAGCTTGTTTGAGTTGAGAAGCTGCATCCTGAATGGAACTGTGCTACTGGACATGCATGCCAACAC GATAGAAGAAATTGCAGATATGGTCCTTGACCAGCAGGTCAGCTCAGGCCAGCTGAATGAAGATGTTCGC CACAGGGTCCACGAAGCATTGATGAAGCAGCATCATCACCAGAATCAGAAAAAACTGGCTAACAGGATTC CTATTGTCCGATCTTTTGCTGATATTGGCAAGAAACAATCAGAACCAAATTCCATGGATAAAAATGCAGG TCAGGTTGTTTCTCCTCAGTCTGCTCCAGCCTGTGCTGAGAATAAAAATGATGTCAGCAGGGAAAACAGC ACTGTAGACTTCAGCAAGGTTGATCTGCATTTTATGAAAAAGATTCCTCCGGGTGCTGAAGCTTCAAACA TCTTGGTAGGAGAACTGGAGTTCCTAGACAGAACTGTGGTTGCCTTTGTCAGGTTGTCTCCAGCTGTCTT GCTCCAAGGACTTGCTGAAGTTCCAATCCCAAGCAGATTTCTGTTCATCCTTCTGGGACCCCTGGGAAAG GGTCAACAGTACCACGAGATTGGCAGATCGATTGCGACCTTAATGACTGATGAGGTGTTTCATGATGTTG CTTACAAAGCTAAAGACCGCAATGACTTGGTATCAGGAATTGATGAGTTTCTGGATCAGGTTACCGTTCT TCCTCCTGGAGAATGGGATCCAAGCATACGAATAGAACCTCCCAAAAATGTCCCTTCCCAGGAGAAGAGG AAGATTCCTGCTGTACCAAATGGAACAGCAGCTCATGGCGAAGCTGAGCCACATGGAGGACACAGCGGAC CTGAACTCCAGCGAACTGGGAGGATTTTTGGGGGACTTATATTAGATATCAAAAGAAAGGCTCCATTCTT CTGGAGTGACTTCAGGGATGCTTTCAGCCTGCAGTGCTTAGCATCGTTCCTGTTTCTCTACTGTGCATGC ATGTCTCCTGTCATCACATTTGGAGGACTGTTGGGAGAAGCAACTGAAGGTCGTATAAGTGCAATCGAAT CACTCTTTGGAGCATCTATGACCGGGATAGCCTATTCTCTTTTTGGTGGACAGCCCCTGACCATATTAGG CAGCACAGGACCTGTTTTGGTGTTTGAAAAGATCTTGTTTAAGTTTTGCAAGGAATACGGCCTGTCGTAC TTGTCCTTACGGGCCAGCATTGGGCTCTGGACTGCAACACTGTGCATCATCCTTGTGGCCACGGACGCGA GCTCACTCGTCTGCTACATCACCCGGTTTACCGAAGAGGCTTTTGCTTCTCTCATTTGCATCATTTTTAT CTATGAAGCCCTGGAGAAGTTGTTTGAGCTCAGTGAAACCTATCCAATCAATATGCACAATGATTTGGAA CTGCTGACACAATACTCATGTAACTGTATGGAGCCACATAGTCCCAGCAATGACACACTGAAGGAATGGC GGGAGTCCAACCTTTCTGCCTCTGACATAATCTGGGGGAACCTAACTGTGTCAGAGTGCAGATCACTGCA CGGGGAGTATGTCGGGCGAGCCTGTGGCCATGGCCACCCCTACGTGCCAGATGTTCTCTTCTGGTCGGTG ATCCTGTTCTTCTCCACAGTTACCATGTCAGCCACCCTGAAGCAGTTCAAGACCAGCCGCTATTTCCCAA CCAAGGTTCGATCCATAGTGAGTGATTTTGCGGTTTTTCTTACAATTCTGTGTATGGTTTTAATTGACTA TGCCATTGGGATCCCATCACCAAAACTACAAGTACCAAGCGTTTTCAAGCCGACCAGAGACGACCGTGGC TGGTTTGTTACACCTTTGGGTCCAAACCCATGGTGGACAATCATAGCTGCCATCATCCCAGCTTTACTCT GTACTATTCTGATTTTCATGGACCAGCAGATTACAGCTGTCATCATCAACAGAAAAGAGCACAAGCTAAA GAAAGGTTGTGGCTATCACCTGGATCTGTTAATGGTGGCAGTCATGCTCGGGGTCTGCTCCATTATGGGC CTGCCATGGTTTGTGGCTGCCACAGTTCTCTCCATCACTCATGTCAACAGCCTCAAGCTCGAATCAGAGT GCTCTGCTCCAGGAGAACAACCCAAGTTTCTCGGCATTCGGGAGCAGAGGGTGACCGGGCTCATGATTTT TATTCTTATGGGTTCATCCGTTTTCATGACCAGCATTCTGAAGTTTATCCCCATGCCAGTGTTATACGGA GTGTTTCTTTATATGGGTGCTTCGTCTCTCAAAGGAATTCAGTTATTTGATAGAATAAAGCTCTTCTGGA TGCCAGCCAAACATCAACCAGATTTCATCTATCTAAGGCACGTGCCCCTCCGGAAAGTCCATCTCTTCAC AGTCATTCAGATGAGTTGTCTCGGCCTTCTGTGGATAATCAAAGTTTCGAGAGCTGCTATTGTCTTTCCT ATGATGGTGTTGGCACTAGTGTTTGTGAGAAAGTTGATGGACTTCTTGTTTACCAAACGGGAACTCAGCT GGCTTGATGATTTAATGCCTGAGAGTAAAAAGAAGAAACTTGAAGATGCTGAGAAAGAAGAAGAACAAAG TATGCTAGCCATGGAGGACGAGGGCACAGTACAACTCCCACTGGAGGGACACTACAGAGACGACCCGTCT GTGATCAATATTTCTGATGAAATGTCAAAGACTGCCATGTGGGGGAACCTTCTAGTTACTGCTGACAACT CAAAAGAAAAGGAGTCACGCTTTCCTTCTAAAAGCAATGAAAGCCGAAAGGAGAAGAAAGCTGACTCAGG GAAAGGCGTTGACAGGGAGACTTGTCTATGA
Translation (1106 aa): MEIKDQGAQMEPLLPTRNDEEAVVDRGGTRSILKTHFEKEDLEGHRTLFIGVHVPLGGRKSHRRHRHRGH KHRKRDRERDSGLEDGRESPSFDTPSQRVQFILGTEDDDEEHLPHDLFTELDEICWREGEDAEWRETARW LKFEEDVEDGGERWSKPYVATLSLHSLFELRSCILNGTVLLDMHANTIEEIADMVLDQQVSSGQLNEDVR HRVHEALMKQHHHQNQKKLANRIPIVRSFADIGKKQSEPNSMDKNAGQVVSPQSAPACAENKNDVSRENS TVDFSKVDLHFMKKIPPGAEASNILVGELEFLDRTVVAFVRLSPAVLLQGLAEVPIPSRFLFILLGPLGK GQQYHEIGRSIATLMTDEVFHDVAYKAKDRNDLVSGIDEFLDQVTVLPPGEWDPSIRIEPPKNVPSQEKR KIPAVPNGTAAHGEAEPHGGHSGPELQRTGRIFGGLILDIKRKAPFFWSDFRDAFSLQCLASFLFLYCAC MSPVITFGGLLGEATEGRISAIESLFGASMTGIAYSLFGGQPLTILGSTGPVLVFEKILFKFCKEYGLSY LSLRASIGLWTATLCIILVATDASSLVCYITRFTEEAFASLICIIFIYEALEKLFELSETYPINMHNDLE LLTQYSCNCMEPHSPSNDTLKEWRESNLSASDIIWGNLTVSECRSLHGEYVGRACGHGHPYVPDVLFWSV ILFFSTVTMSATLKQFKTSRYFPTKVRSIVSDFAVFLTILCMVLIDYAIGIPSPKLQVPSVFKPTRDDRG WFVTPLGPNPWWTIIAAIIPALLCTILIFMDQQITAVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSIMG LPWFVAATVLSITHVNSLKLESECSAPGEQPKFLGIREQRVTGLMIFILMGSSVFMTSILKFIPMPVLYG VFLYMGASSLKGIQLFDRIKLFWMPAKHQPDFIYLRHVPLRKVHLFTVIQMSCLGLLWIIKVSRAAIVFP MMVLALVFVRKLMDFLFTKRELSWLDDLMPESKKKKLEDAEKEEEQSMLAMEDEGTVQLPLEGHYRDDPS VINISDEMSKTAMWGNLLVTADNSKEKESRFPSKSNESRKEKKADSGKGVDRETCL
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