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Report for CCDS56944.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56944.1 Reviewed, withdrawal pending Mus musculus 14 Tmem254b 23 108 98 CCDS HistoryNCBI Gene:100039257Re-query CCDS DB by CCDS ID:56944.1Re-query CCDS DB by GeneID:100039257See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by CCDS collaboration)

Sequence IDs included in CCDS 56944.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022418.14 ENSMUSP00000022418.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022418.14Link to Ensembl Protein Viewer:ENSMUSP00000022418.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022418Re-query CCDS DB by Protein ID:ENSMUSP00000022418
Original member NCBI NM_001270495.1 NP_001257424.1 Removed not alive Link to Nucleotide Sequence:NM_001270495.1Link to Protein Sequence:NP_001257424.1Re-query CCDS DB by Nucleotide ID:NM_001270495Re-query CCDS DB by Protein ID:NP_001257424Link to BLAST:NP_001257424.1

Chromosomal Locations for CCDS 56944.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 26204156 26204276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26204891 26204950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26205167 26205270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26206667 26206753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (372 nt):
ATGGGGACGGCCACAGGCGCCGGCTACTTCCAGAGGGGCAGCTTGTTCTGGTTCACAGTCATCACCGTCT
CCTTCGGCTACTACACGTGGGCTGTCTTCTGGCCTCAGAGCATCCCTTATCAGAGCCTTGGGCCCCTGGG
TCCCTTCACGAAGTATTTGGTGGACCACTATCACACCTTCCTAAGGAATGGGTATTGGCTTGCTTGGCTA
ATTCATGTGGGAGAGTCCTTGTATGCCTTGGTTTTATGCAAGCGTAAAGGAATCACAGACGTCCAGGCCC
AGCTCCTCTGGTTCCTACAGACTTTTCTGTTTGGTGTAGCCTCTCTCTCCATCCTGATTGCTTACAGATC
AAAGCGCCAAAAACACAATTAA

Translation (123 aa):
MGTATGAGYFQRGSLFWFTVITVSFGYYTWAVFWPQSIPYQSLGPLGPFTKYLVDHYHTFLRNGYWLAWL
IHVGESLYALVLCKRKGITDVQAQLLWFLQTFLFGVASLSILIAYRSKRQKHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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