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Report for CCDS56943.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56943.1 Reviewed, withdrawal pending Mus musculus 14 Tmem254b 23 108 98 CCDS HistoryNCBI Gene:100039257Re-query CCDS DB by CCDS ID:56943.1Re-query CCDS DB by GeneID:100039257See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by CCDS collaboration)

Sequence IDs included in CCDS 56943.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100806.5 ENSMUSP00000098369.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100806.5Link to Ensembl Protein Viewer:ENSMUSP00000098369.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100806Re-query CCDS DB by Protein ID:ENSMUSP00000098369
Original member NCBI NM_001270496.1 NP_001257425.1 Removed not alive Link to Nucleotide Sequence:NM_001270496.1Link to Protein Sequence:NP_001257425.1Re-query CCDS DB by Nucleotide ID:NM_001270496Re-query CCDS DB by Protein ID:NP_001257425Link to BLAST:NP_001257425.1

Chromosomal Locations for CCDS 56943.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 26204156 26204276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26204891 26204950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26205167 26205270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26206414 26206518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGGTGGTGGCGAAGTCGGAGGCCCGTAGGGACCCCACTGCATACTTCCGTGTAGCCAGACTCTGGCCCT
CACTGATCACCGCCCTAGGGCTGGGCTACTTCGCGTGGGCTGTCTTCTGGCCTCAGAGCATCCCTTATCA
GAGCCTTGGGCCCCTGGGTCCCTTCACGAAGTATTTGGTGGACCACTATCACACCTTCCTAAGGAATGGG
TATTGGCTTGCTTGGCTAATTCATGTGGGAGAGTCCTTGTATGCCTTGGTTTTATGCAAGCGTAAAGGAA
TCACAGACGTCCAGGCCCAGCTCCTCTGGTTCCTACAGACTTTTCTGTTTGGTGTAGCCTCTCTCTCCAT
CCTGATTGCTTACAGATCAAAGCGCCAAAAACACAATTAA

Translation (129 aa):
MVVAKSEARRDPTAYFRVARLWPSLITALGLGYFAWAVFWPQSIPYQSLGPLGPFTKYLVDHYHTFLRNG
YWLAWLIHVGESLYALVLCKRKGITDVQAQLLWFLQTFLFGVASLSILIAYRSKRQKHN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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