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Report for CCDS54945.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54945.1 Public Homo sapiens 5 WWC1 24 110 108 CCDS HistoryNCBI Gene:23286Re-query CCDS DB by CCDS ID:54945.1Re-query CCDS DB by GeneID:23286See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54945.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000521089.5 ENSP00000427772.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000521089.5Link to Ensembl Protein Viewer:ENSP00000427772.1Re-query CCDS DB by Nucleotide ID:ENST00000521089Re-query CCDS DB by Protein ID:ENSP00000427772
Original member Current member NCBI NM_001161661.2 NP_001155133.1 Accepted alive Link to Nucleotide Sequence:NM_001161661.2Link to Protein Sequence:NP_001155133.1Re-query CCDS DB by Nucleotide ID:NM_001161661Re-query CCDS DB by Protein ID:NP_001155133Link to BLAST:NP_001155133.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001155133.1 1119 Q8IX03-2 1119 100% 0 0

Chromosomal Locations for CCDS 54945.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 168292153 168292271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168371424 168371533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168385211 168385414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168397724 168397800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168399488 168399567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168406198 168406327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168408507 168408653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168409922 168409995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168414348 168414590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168422008 168422097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168423533 168424068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168428033 168428141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168428707 168428787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168430137 168430223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168431252 168431444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168441682 168441834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168444494 168444585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168453968 168454100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168455356 168455520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168460650 168460742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168464711 168464962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168467840 168467964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 168468951 168469017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3360 nt):
ATGCCCCGGCCGGAGCTGCCCCTGCCGGAGGGCTGGGAGGAGGCGCGCGACTTCGACGGCAAGGTCTACT
ACATAGACCACACGAACCGCACCACCAGCTGGATCGACCCGCGGGACAGGTACACCAAACCGCTCACCTT
TGCTGACTGCATTAGTGATGAGTTGCCGCTAGGATGGGAAGAGGCATATGACCCACAGGTTGGAGATTAC
TTCATAGACCACAACACCAAAACCACTCAGATTGAGGATCCTCGAGTACAATGGCGGCGGGAGCAGGAAC
ATATGCTGAAGGATTACCTGGTGGTGGCCCAGGAGGCTCTGAGTGCACAAAAGGAGATCTACCAGGTGAA
GCAGCAGCGCCTGGAGCTTGCACAGCAGGAGTACCAGCAACTGCATGCCGTCTGGGAGCATAAGCTGGGC
TCCCAGGTCAGCTTGGTCTCTGGTTCATCATCCAGCTCCAAGTATGACCCTGAGATCCTGAAAGCTGAAA
TTGCCACTGCAAAATCCCGGGTCAACAAGCTGAAGAGAGAGATGGTTCACCTCCAGCACGAGCTGCAGTT
CAAAGAGCGTGGCTTTCAGACCCTGAAGAAAATCGATAAGAAAATGTCTGATGCTCAGGGCAGCTACAAA
CTGGATGAAGCTCAGGCTGTCTTGAGAGAAACAAAAGCCATCAAAAAGGCTATTACCTGTGGGGAAAAGG
AAAAGCAAGATCTCATTAAGAGCCTTGCCATGTTGAAGGACGGCTTCCGCACTGACAGGGGGTCTCACTC
AGACCTGTGGTCCAGCAGCAGCTCTCTGGAGAGTTCGAGTTTCCCGCTACCGAAACAGTACCTGGATGTG
AGCTCCCAGACAGACATCTCGGGAAGCTTCGGCATCAACAGCAACAATCAGTTGGCAGAGAAGGTCAGAT
TGCGCCTTCGATATGAAGAGGCTAAGAGAAGGATCGCCAACCTGAAGATCCAGCTGGCCAAGCTTGACAG
TGAGGCCTGGCCTGGGGTGCTGGACTCAGAGAGGGACCGGCTGATCCTTATCAACGAGAAGGAGGAGCTG
CTGAAGGAGATGCGCTTCATCAGCCCCCGCAAGTGGACCCAGGGGGAGGTGGAGCAGCTGGAGATGGCCC
GGAAGCGGCTGGAAAAGGACCTGCAGGCAGCCCGGGACACCCAGAGCAAGGCGCTGACGGAGAGGTTAAA
GTTAAACAGTAAGAGGAACCAGCTTGTGAGAGAACTGGAGGAAGCCACCCGGCAGGTGGCAACTCTGCAC
TCCCAGCTGAAAAGTCTCTCAAGCAGCATGCAGTCCCTGTCCTCAGGCAGCAGCCCCGGATCCCTCACGT
CCAGCCGGGGCTCCCTGGTTGCATCCAGCCTGGACTCCTCCACTTCAGCCAGCTTCACTGACCTCTACTA
TGACCCCTTTGAGCAGCTGGACTCAGAGCTGCAGAGCAAGGTGGAGTTCCTGCTCCTGGAGGGGGCCACC
GGCTTCCGGCCCTCAGGCTGCATCACCACCATCCACGAGGATGAGGTGGCCAAGACCCAGAAGGCAGAGG
GAGGTGGCCGCCTGCAGGCTCTGCGTTCCCTGTCTGGCACCCCAAAGTCCATGACCTCCCTATCCCCACG
TTCCTCTCTCTCCTCCCCCTCCCCACCCTGTTCCCCTCTCATGGCTGACCCCCTCCTGGCTGGTGATGCC
TTCCTCAACTCCTTGGAGTTTGAAGACCCGGAGCTGAGTGCCACTCTTTGTGAACTGAGCCTTGGTAACA
GCGCCCAGGAAAGATACCGGCTGGAGGAACCAGGAACGGAGGGCAAGCAGCTGGGCCAAGCTGTGAATAC
GGCCCAGGGGTGTGGCCTGAAAGTGGCCTGTGTCTCAGCCGCCGTATCGGACGAGTCAGTGGCTGGAGAC
AGTGGTGTGTACGAGGCTTCCGTGCAGAGACTGGGTGCTTCAGAAGCTGCTGCATTTGACAGTGACGAAT
CGGAAGCAGTGGGTGCGACCCGAATTCAGATTGCCCTGAAGTATGATGAGAAGAATAAGCAATTTGCAAT
ATTAATCATCCAGCTGAGTAACCTTTCTGCTCTGTTGCAGCAACAAGACCAGAAAGTGAATATCCGCGTG
GCTGTCCTTCCTTGCTCTGAAAGCACAACCTGCCTGTTCCGGACCCGGCCTCTGGACGCCTCAGACACTC
TAGTGTTCAATGAGGTGTTCTGGGTATCCATGTCCTATCCAGCCCTTCACCAGAAGACCTTAAGAGTCGA
TGTCTGTACCACCGACAGGAGCCATCTGGAAGAGTGCCTGGGAGGCGCCCAGATCAGCCTGGCGGAGGTC
TGCCGGTCTGGGGAGAGGTCGACTCGCTGGTACAACCTTCTCAGCTACAAATACTTGAAGAAACAGAGCA
GGGAGCTCAAGCCAGTGGGAGTCATGGCCCCTGCCTCAGGGCCTGCCAGCACGGACGCTGTGTCTGCTCT
GTTGGAACAGACAGCAGTGGAGCTGGAGAAGAGGCAGGAGGGCAGGAGCAGCACACAGACACTGGAAGAC
AGCTGGAGGTATGAGGAGACCAGTGAGAATGAGGCAGTAGCCGAGGAAGAGGAGGAGGAGGTGGAGGAGG
AGGAGGGAGAAGAGGATGTTTTCACCGAGAAAGCCTCACCTGATATGGATGGGTACCCAGCATTAAAGGT
GGACAAAGAGACCAACACGGAGACCCCGGCCCCATCCCCCACAGTGGTGCGACCTAAGGACCGGAGAGTG
GGCACCCCGTCCCAGGGGCCATTTCTTCGAGGGAGCACCATCATCCGCTCTAAGACCTTCTCCCCAGGAC
CCCAGAGCCAGTACGTGTGCCGGCTGAATCGGAGTGATAGTGACAGCTCCACTCTGTCCAAAAAGCCACC
TTTTGTTCGAAACTCCCTGGAGCGACGCAGCGTCCGGATGAAGCGGCCGTCCCCACCCCCACAGCCTTCC
TCGGTCAAGTCGCTGCGCTCCGAGCGTCTGATCCGTACCTCGCTGGACCTGGAGTTAGACCTGCAGGCGA
CAAGAACCTGGCACAGCCAATTGACCCAGGAGATCTCGGTGCTGAAGGAGCTCAAGGAGCAGCTGGAACA
AGCCAAGAGCCACGGGGAGAAGGAGCTGCCACAGTGGTTGCGTGAGGACGAGCGTTTCCGCCTGCTGCTG
AGGATGCTGGAGAAGCGGCAGATGGACCGAGCGGAGCACAAGGGTGAGCTTCAGACAGACAAGATGATGA
GGGCAGCTGCCAAGGATGTGCACAGGCTCCGAGGCCAGAGCTGTAAGGAACCCCCAGAAGTTCAGTCTTT
CAGGGAGAAGATGGCATTTTTCACCCGGCCTCGGATGAATATCCCAGCTCTCTCTGCAGATGACGTCTAA

Translation (1119 aa):
MPRPELPLPEGWEEARDFDGKVYYIDHTNRTTSWIDPRDRYTKPLTFADCISDELPLGWEEAYDPQVGDY
FIDHNTKTTQIEDPRVQWRREQEHMLKDYLVVAQEALSAQKEIYQVKQQRLELAQQEYQQLHAVWEHKLG
SQVSLVSGSSSSSKYDPEILKAEIATAKSRVNKLKREMVHLQHELQFKERGFQTLKKIDKKMSDAQGSYK
LDEAQAVLRETKAIKKAITCGEKEKQDLIKSLAMLKDGFRTDRGSHSDLWSSSSSLESSSFPLPKQYLDV
SSQTDISGSFGINSNNQLAEKVRLRLRYEEAKRRIANLKIQLAKLDSEAWPGVLDSERDRLILINEKEEL
LKEMRFISPRKWTQGEVEQLEMARKRLEKDLQAARDTQSKALTERLKLNSKRNQLVRELEEATRQVATLH
SQLKSLSSSMQSLSSGSSPGSLTSSRGSLVASSLDSSTSASFTDLYYDPFEQLDSELQSKVEFLLLEGAT
GFRPSGCITTIHEDEVAKTQKAEGGGRLQALRSLSGTPKSMTSLSPRSSLSSPSPPCSPLMADPLLAGDA
FLNSLEFEDPELSATLCELSLGNSAQERYRLEEPGTEGKQLGQAVNTAQGCGLKVACVSAAVSDESVAGD
SGVYEASVQRLGASEAAAFDSDESEAVGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRV
AVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEV
CRSGERSTRWYNLLSYKYLKKQSRELKPVGVMAPASGPASTDAVSALLEQTAVELEKRQEGRSSTQTLED
SWRYEETSENEAVAEEEEEEVEEEEGEEDVFTEKASPDMDGYPALKVDKETNTETPAPSPTVVRPKDRRV
GTPSQGPFLRGSTIIRSKTFSPGPQSQYVCRLNRSDSDSSTLSKKPPFVRNSLERRSVRMKRPSPPPQPS
SVKSLRSERLIRTSLDLELDLQATRTWHSQLTQEISVLKELKEQLEQAKSHGEKELPQWLREDERFRLLL
RMLEKRQMDRAEHKGELQTDKMMRAAAKDVHRLRGQSCKEPPEVQSFREKMAFFTRPRMNIPALSADDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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