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Report for CCDS54655.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54655.1 Public Homo sapiens 3 GYG1 24 110 108 CCDS HistoryNCBI Gene:2992Re-query CCDS DB by CCDS ID:54655.1Re-query CCDS DB by GeneID:2992See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54655.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000484197.5 ENSP00000420683.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000484197.5Link to Ensembl Protein Viewer:ENSP00000420683.1Re-query CCDS DB by Nucleotide ID:ENST00000484197Re-query CCDS DB by Protein ID:ENSP00000420683
Original member Current member NCBI NM_001184721.2 NP_001171650.1 Accepted alive Link to Nucleotide Sequence:NM_001184721.2Link to Protein Sequence:NP_001171650.1Re-query CCDS DB by Nucleotide ID:NM_001184721Re-query CCDS DB by Protein ID:NP_001171650Link to BLAST:NP_001171650.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171650.1 279 P46976-3 279 100% 0 0

Chromosomal Locations for CCDS 54655.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 148991641 148991647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 148994142 148994277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 148996302 148996476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 148996742 148996904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149009276 149009402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 149026760 149026991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGACAGATCAGGCCTTTGTGACACTAACCACAAACGATGCCTACGCCAAAGGTGCCCTGGTCCTGGGAT
CA
TCTCTGAAACAGCACAGGACCACCAGGAGGCTGGTCGTGCTCGCCACCCCTCAGGTCTCAGACTCCAT
G
AGAAAAGTTTTAGAGACAGTCTTTGATGAAGTCATCATGGTAGATGTCTTGGACAGTGGCGATTCTGCT
CAT
CTAACCTTAATGAAGAGGCCAGAGTTGGGTGTCACGCTGACAAAGCTCCACTGCTGGTCGCTTACAC
AG
TATTCAAAATGTGTATTCATGGATGCAGATACTCTGGTCCTAGCAAATATTGATGATCTTTTTGACAG
A
GAAGAATTGTCAGCAGCACCAGACCCAGGGTGGCCTGACTGCTTCAATTCCGGAGTCTTCGTTTATCAG
CCT
TCAGTTGAAACATACAATCAGCTGTTGCATCTTGCTTCTGAGCAAGGTAGTTTTGATGGTGGGGACC
AA
GGCATACTGAACACATTTTTTAGCAGCTGGGCAACAACAGATATCAGAAAACACCTGCCGTTTATTTA
T
AACCTAAGCAGCATCTCTATATACTCCTACCTCCCGGCATTTAAAGTGAAGATGTCTCAGGAGCCATAT
CAC
ATCTGTCCCTTGGGGAGATCCCAGCTATGGCACAGCCGTTTGTATCCTCGGAAGAACGGAAGGAACG
AT
GGGAACAGGGCCAGGCTGATTATATGGGAGCAGATTCCTTTGACAACATCAAGAGGAAACTTGACACT
T
ACCTCCAGTAGAAACACTGCATTTTTCTGTGAACACATCCACTTCACAAGCCTTGTTTCTGATACTTAG


Translation (279 aa):
MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSA
H
LTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTL
VLANIDDLFDREELSAAPDPGWPDCFNSGVFVYQ
P
SVETYNQLLHLASEQGSFD
GGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVKMSQEPY
H
ICPLGRSQLWHSRLYPRKNGRNDGNRARLIIWEQIPLTTSRGNLTLTSSRNTAFFCEHIHFTSLVSDT




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser