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Report for CCDS52031.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52031.1 Public Mus musculus 7 Sult2a1 23 108 98 CCDS HistoryNCBI Gene:20859Re-query CCDS DB by CCDS ID:52031.1Re-query CCDS DB by GeneID:20859See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52031.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108522.4 ENSMUSP00000104162.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108522.4Link to Ensembl Protein Viewer:ENSMUSP00000104162.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000108522Re-query CCDS DB by Protein ID:ENSMUSP00000104162
Original member Current member NCBI NM_001111296.2 NP_001104766.1 Accepted alive Link to Nucleotide Sequence:NM_001111296.2Link to Protein Sequence:NP_001104766.1Re-query CCDS DB by Nucleotide ID:NM_001111296Re-query CCDS DB by Protein ID:NP_001104766Link to BLAST:NP_001104766.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001104766.1 285 P52843 285 100% 0 0

Chromosomal Locations for CCDS 52031.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 13796355 13796467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13801382 13801559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13804030 13804124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13832577 13832703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13835961 13836169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 13837221 13837356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGATGTCAGACTATAATTGGTTTGAAGGCATACCTTTTCCTGCCATATCATATCAAAGAGAAATTTTGG
AA
GATATTCGTAATAAGTTTGTGGTGAAAGAAGAAGACTTGTTGATATTAACTTACCCCAAGTCAGGAAC
G
AACTGGCTGATTGAGATTGTATGCTTGATTCAGACCAAGGGAGATCCGAAGTGGATCCAAACTGTGCCC
ATT
TGGAACCGCTCACCCTGGATAGAGACTGATATAGGATATTCTGCATTAATCAATAAGGAAGGACCAC
GA
CTCATAACCTCCCATCTTCCCATCCATCTCTTCTCCAAGTCTTTCTTCAGTTCCAAGGCCAAGGCGAT
C
TATCTCGTGAGAAATCCCAGAGATATTCTTGTGTCTGGTTACTTTTTCTGGGGTAACACAAACCTTGTG
AAG
AATCCAGGGTCACTCGGAACTTATTTTGAATGGTTCCTCAAAGGAAATGTTCTATTCGGATCATGGT
TT
GAGCATGTTCGTGGCTGGCTGTCCATGAGAGAATGGGACAACTTTTTGGTACTGTACTATGAAGACAT
A
AAAAAGGATACAAAGGGAACCATAAAGAAGATCTGTGACTTCCTAGGGAAAAATTTAGGGCCAGATGAG
CTG
GATCTCGTCCTCAAGTACAGCTCTTTCCAAGCCATGAAAGAAAACAACATGTCCAATTTTAGTCTCA
TT
AAGGAAGATCAGGTTACTAATGGCTTGAAGCTCATGAGAAAAGGCACAATTGGGGACTGGAAGAATCA
C
TTCACAGTAGCCCAAGCTGAAGCCTTCGATAAAGTTTTCCAGGAGAAAATGGCTGGATTCCCCCCAGGG
ATT
TTCCCATGGGAATAA


Translation (285 aa):
MMSDYNWFEGIPFPAISYQREILEDIRNKFVVKEEDLLILTYPKSGTNWLIEIVCLIQTKGDPKWIQTVP
I
WNRSPWIETDIGYSALINKEGPRLITSHLPIHLFSKSFFSSKAK
AIYLVRNPRDILVSGYFFWGNTNLV
K
NPGSLGTYFEWFLKGN
VLFGSWFEHVRGWLSMREWDNFLVLYYEDIKKDTKGTIKKICDFLGKNLGPDE
L
DLVLKYSSFQAMKENNMSNFSLIKEDQVTNGLKLMRK
GTIGDWKNHFTVAQAEAFDKVFQEKMAGFPPG
I
FPWE




Links Key
 Links to:   History report
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  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser