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Report for CCDS49997.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49997.1 Public Mus musculus 17 Zfp943 23 108 98 CCDS HistoryNCBI Gene:74670Re-query CCDS DB by CCDS ID:49997.1Re-query CCDS DB by GeneID:74670See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49997.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055349.14 ENSMUSP00000059554.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055349.14Link to Ensembl Protein Viewer:ENSMUSP00000059554.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000055349Re-query CCDS DB by Protein ID:ENSMUSP00000059554
Original member Current member NCBI NM_001025373.2 NP_001020544.1 Accepted alive Link to Nucleotide Sequence:NM_001025373.2Link to Protein Sequence:NP_001020544.1Re-query CCDS DB by Nucleotide ID:NM_001025373Re-query CCDS DB by Protein ID:NP_001020544Link to BLAST:NP_001020544.1

Chromosomal Locations for CCDS 49997.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 21988072 21988101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 21990779 21990905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 21992092 21993458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGAATGCTTCTCTGGTAAATGCTCCCCAGGGTCTGTTAACATTCAAGGATGTGGCTGTGGACTTCTCAC
AGGATGAATGGAAATATCTTGACCGTGCTCAGAGGGCATTGTATGTGGATGTGATGTTAGAGAATTACAA
AAATCTCTTTTTTGTGGAGAGCCATTACTTAACTCATAAATATGAGAACATCTTGGATGAAGACACACAG
TGTATTGTCCACGAGCATATGAATCTCCAGTCTTATAAATGTCATGAACTTGGAAAACTCATTCATGAAC
ACACCCAAAGTACATCTTACAGAGCTAGTCATAAAAATATATCTCTTGAATCATCATATGTAAACAGACA
TGGTTCTATGAACACCAAAGAACCTTGCAGATGTAAAAACTGTGTAAACTGTTTAAATTTATGTTCTATC
ATTAGTCTTTATCAAGGAATCCACATAGGACAAAAAGAACATAACACAGAGCTTGATAAGGCTTTTGACA
CTAAACATGAACTCATGCTTAAACAAACCAATAGTGGAAATAAACCTTACAAATGCAGTAAATGTGACAA
ATGCTTCACCCGTAAAGGAGATCTTTGGAGTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGT
AGTAAATGTGACAAATGCTTTACCCGCAAAGGAGACGTTATTATTCATGAGAGAATTCATACAGGAGAGA
AACCTTACAAATGTAGTGAATGTGGCAAATGCTTTACCCACAAAGGTGGTCTTAGAAGTCATCAAAGAAT
TCATACAGGAGGGAAACCTTACAAATGTTGTGAATGTATCAAATCTTTTAACCGGAAACGCAATCTTAGA
ATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGTACTGAATGCACCAAATGCTTTACACGCA
AAGGAGATCTTATTATTCATCATAGAATTCATACAGGAGAGAAACCTTACAAATGTAATGAATGTGAAAA
ATGCTTTACTGTCAAAAGTGACCTTGGAATTCATCAACGGATTCATACAGGAGGGAAACCTTACAAATGT
AGTGAATGTGTTAAATCTTTTACACAGAAAGGCAATCTTAGAAGACATCAGAGAATACATACAGGAGAGA
AACCTTACAAATGTAGTGAATGTAACAAATGTTTCACCCAGAAAGACATTCTTAGAAGACATCAGAGAAT
TCATACAGGAGAGAAACCTTACAAATGTAGTGAATGTGACAAATGTTTCACTCAGAAAGGCGACCTTAGA
AGACATCAGAGAATTCATACAGGAGAGAAACCTTATAAGTGTAGTGAATGTGACAAATGTTTTGCCCTGA
AAAGTGAGCTTAGAATTCATCAGCGAATTCATATAGGAGGTAAATTATACAATTGTAGTGAATGCGACAA
ATGTTTTACCCAAAAATGCAGTCTTGGTATTCATCAGAGAACACATGCAGCAGAGAAACTGTATAAATAT
GGTGAATGTGATAAATTCCTAACCCCGAAATGTAATCTTAACATTCATCATTAA

Translation (507 aa):
MNASLVNAPQGLLTFKDVAVDFSQDEWKYLDRAQRALYVDVMLENYKNLFFVESHYLTHKYENILDEDTQ
CIVHEHMNLQSYKCHELGKLIHEHTQSTSYRASHKNISLESSYVNRHGSMNTKEPCRCKNCVNCLNLCSI
ISLYQGIHIGQKEHNTELDKAFDTKHELMLKQTNSGNKPYKCSKCDKCFTRKGDLWSHQRIHTGEKPYKC
SKCDKCFTRKGDVIIHERIHTGEKPYKCSECGKCFTHKGGLRSHQRIHTGGKPYKCCECIKSFNRKRNLR
IHQRIHTGEKPYKCTECTKCFTRKGDLIIHHRIHTGEKPYKCNECEKCFTVKSDLGIHQRIHTGGKPYKC
SECVKSFTQKGNLRRHQRIHTGEKPYKCSECNKCFTQKDILRRHQRIHTGEKPYKCSECDKCFTQKGDLR
RHQRIHTGEKPYKCSECDKCFALKSELRIHQRIHIGGKLYNCSECDKCFTQKCSLGIHQRTHAAEKLYKY
GECDKFLTPKCNLNIHH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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