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Report for CCDS48700.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48700.1 Public Mus musculus 10 Il22b 23 108 98 CCDS HistoryNCBI Gene:116849Re-query CCDS DB by CCDS ID:48700.1Re-query CCDS DB by GeneID:116849See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48700.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000163808.1 ENSMUSP00000128415.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000163808.1Link to Ensembl Protein Viewer:ENSMUSP00000128415.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000163808Re-query CCDS DB by Protein ID:ENSMUSP00000128415
Original member Current member NCBI NM_054079.2 NP_473420.2 Accepted alive Link to Nucleotide Sequence:NM_054079.2Link to Protein Sequence:NP_473420.2Re-query CCDS DB by Nucleotide ID:NM_054079Re-query CCDS DB by Protein ID:NP_473420Link to BLAST:NP_473420.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_473420.2 179 Q9JJY8 179 100% 0 0

Chromosomal Locations for CCDS 48700.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 118290151 118290228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118293121 118293186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118294102 118294245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118294345 118294410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 118294804 118294989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (540 nt):
ATGGCTGTCCTGCAGAAATCTATGAGTTTTTCCCTTATGGGGACTTTGGCCGCCAGCTGCCTGCTTCTCA
TTGCCCTGTGGGCCCAGGAGGCAAATGCGCTGCCCATCAACACCCGGTGCAAGCTTGAGGTGTCCAACTT
CCAGCAGCCGTACATCGTCAACCGCACCTTTATGCTGGCCAAGGAGGTCAGCCTTGCAGATAACAACACA
GACGTCTGGCTCATCGGGGAGAAACTGTTCCGAGGAGTCAGTGCTAAAGATCAGTGCTACCTGATGAAGC
AGGTGCTCAACTTCACCCTGGAAGACGTTCTGCTCCCCCAGTCAGACAGGTTCCAGCCCTACATGCAGGA
GGTGGTGCCTTTCCTGACCAAACTCAGCAATCAGCTCAGCTCCTGTCACATCAGCGGTGACGACCAGAAC
ATCCAGAAGAATGTCAGAAGGCTGAAGGAGACAGTGAAAAAGCTTGGAGAGAGCGGAGAGATCAAAGCGA
TCGGGGAACTGGACCTGCTGTTTATGTCTCTGAGAAATGCTTGCGTCTGA

Translation (179 aa):
MAVLQKSMSFSLMGTLAASCLLLIALWAQEANALPINTRCKLEVSNFQQPYIVNRTFMLAKEVSLADNNT
DVWLIGEKLFRGVSAKDQCYLMKQVLNFTLEDVLLPQSDRFQPYMQEVVPFLTKLSNQLSSCHISGDDQN
IQKNVRRLKETVKKLGESGEIKAIGELDLLFMSLRNACV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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