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Report for CCDS48688.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48688.1 Public Mus musculus 10 Acss3 23 108 98 CCDS HistoryNCBI Gene:380660Re-query CCDS DB by CCDS ID:48688.1Re-query CCDS DB by GeneID:380660See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48688.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165067.8 ENSMUSP00000128209.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165067.8Link to Ensembl Protein Viewer:ENSMUSP00000128209.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165067Re-query CCDS DB by Protein ID:ENSMUSP00000128209
Original member Current member NCBI NM_001142804.2 NP_001136276.1 Accepted alive Link to Nucleotide Sequence:NM_001142804.2Link to Protein Sequence:NP_001136276.1Re-query CCDS DB by Nucleotide ID:NM_001142804Re-query CCDS DB by Protein ID:NP_001136276Link to BLAST:NP_001136276.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136276.1 682 Q14DH7-1 682 100% 0 0

Chromosomal Locations for CCDS 48688.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 106936164 106936232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 106937144 106937319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 106937404 106937503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 106948656 106948778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 106951974 106952055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 106962962 106963025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 106966948 106967043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 106988806 106988909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 107004664 107004815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 107023654 107023749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 107023857 107023937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 107045213 107045353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 107049364 107049498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 107053328 107053516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 107084807 107084951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 107123288 107123583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2049 nt):
ATGAAGCCATCCTGGTTGCAATGTCGCAAAGTAACAGGCGCCGGGACGCTTGGGGCACCTCTGCCAGGAT
CCCCTTCAGTAAGAGGAGCCGCTGTGACCCGAAGGGCTTTGGTGGCCGGGTTTGGGGGCAGGGGCTGCAG
GGCTCTGACCACCGGCAGTGGTGGTGAGTACAAGACCCACTTCGCAGCCTCTGTGGCTGACCCCGAAAGA
TTCTGGGGTAAAGCTGCTGAGCAGATCAGTTGGTACAAGCCCTGGACCAAAACTCTAGAGAGCAGATACC
CGCCTTCCACAAGTTGGTTTGTGGAAGGGATGCTGAACATTTGTTACAATGCTATTGATCGGCACATTGA
AAATGGCCAAGGGGATAAGATTGCTATCATCTATGACAGTCCCGTTACAGACACCAAAGCAACTATCTCC
TATAAGGAAGTCTTGGAGCAGGTCTCTAAGCTGGCTGGTGTCTTGGTCAAGCAGGGTGTCAAGAAAGGCG
ATACAGTGGTCATCTATATGCCCATGATCCCACAAGCAATATATACCATGCTGGCGTGTGCAAGGATAGG
AGCAATCCACAGTCTCATATTTGGAGGATTTGCATCCAAAGAATTAAGTACGCGCATTGATCATGCGAAG
CCTAAGGTGGTTGTTACGGCATCATTTGGCATTGAACCAGGAAGGAAGGTGGAGTACATCCCACTTCTAG
AAGAAGCTCTGAGGATAGGACAGCACAGGCCAGACAGAGTTCTCATTTACAGCCGTCCAAACATGGAGAA
AGTTCCTTTGATGTCAGGTCGTGATCTTGATTGGGAAGAAGAAATGGCAAAAGCCCAGTCTCATGACTGC
GTGCCTGTTCTCTCAGAGCATCCATTGTACATTCTCTACACATCTGGAACAACTGGGCTGCCTAAGGGTG
TGGTTAGACCCACTGGGGGCTATGCTGTCATGTTGAACTGGACAATGTCTTCCATATATGGACTCAAACC
TGGAGAGGTATGGTGGGCAGCTTCTGACTTAGGCTGGGTTGTTGGACATTCCTATATTTGCTATGGGCCT
CTTCTCCATGGAAACACAACAGTTTTATATGAGGGAAAGCCTGTGGGAACACCGGATGCTGGCGCTTATT
TCCGTGTGCTTGCAGAGCATGGAGTGGCTGCCTTGTTTACAGCACCAACTGCAATTAGAGCCATCCGTCA
ACAGGACCCTGGGGCAGCCTTGGGGAAGCAGTACTCTCTGACAAGGTTCAAGACACTGTTTGTAGCTGGG
GAAAGATGTGATGTGGAGACCCTAGAATGGTCCAAAAAAGTCTTCCGAGTTCCCGTTCTAGACCATTGGT
GGCAAACAGAGACTGGATCCCCCATCACAGCATCATGTATTGGATTAGGTAACTCCAAAACACCTCCACC
AGGACAAGCAGGAAAATGTGTTCCAGGATACAATGTTATGATTTTGGATGACAACATGCAAAAACTGAAG
GCTAGAAGCTTAGGAAACATTGTGGTAAAGTTGCCATTACCACCTGGGGCTTTTTCAGGACTCTGGAAGA
ACCAGGAAGCATTCAAGCATTTATACTTTGAGAAATTTCCTGGATACTATGACACTATGGATGCCGGCTA
CATGGATGAGGAAGGCTACCTATATGTGATGTCCCGAGTGGATGATGTCATAAACGTTGCAGGCCACAGG
ATTTCTGCAGGCGCTATTGAGGAGTCAGTCCTCTCACACGGCACTGTGGCTGACTGCGCTGTGGTTGGCA
AGGAAGACCCCTTGAAAGGTCACGTCCCCTTAGCACTCTGCGTGTTGAAGAAAGACGTAAATGCATCAGA
AGAACAAGTTTTGGAAGAGATTGTGAAACATGTTAGGCAGAGCATTGGCCCTGTGGCTGCTTTTCGAAAT
GCGGTTTTCGTCAAACAGTTACCCAAAACCAGGTCTGGCAAAATTCCACGGTCTACACTGTCTGCCCTGG
TTAATGGCAAGCCTTATAAGGTGACCCCTACGATTGAGGACCCCAGCATTTTTGGTCACATTGAAGAAGT
GCTGAAGCAGGCTGTGTGA

Translation (682 aa):
MKPSWLQCRKVTGAGTLGAPLPGSPSVRGAAVTRRALVAGFGGRGCRALTTGSGGEYKTHFAASVADPER
FWGKAAEQISWYKPWTKTLESRYPPSTSWFVEGMLNICYNAIDRHIENGQGDKIAIIYDSPVTDTKATIS
YKEVLEQVSKLAGVLVKQGVKKGDTVVIYMPMIPQAIYTMLACARIGAIHSLIFGGFASKELSTRIDHAK
PKVVVTASFGIEPGRKVEYIPLLEEALRIGQHRPDRVLIYSRPNMEKVPLMSGRDLDWEEEMAKAQSHDC
VPVLSEHPLYILYTSGTTGLPKGVVRPTGGYAVMLNWTMSSIYGLKPGEVWWAASDLGWVVGHSYICYGP
LLHGNTTVLYEGKPVGTPDAGAYFRVLAEHGVAALFTAPTAIRAIRQQDPGAALGKQYSLTRFKTLFVAG
ERCDVETLEWSKKVFRVPVLDHWWQTETGSPITASCIGLGNSKTPPPGQAGKCVPGYNVMILDDNMQKLK
ARSLGNIVVKLPLPPGAFSGLWKNQEAFKHLYFEKFPGYYDTMDAGYMDEEGYLYVMSRVDDVINVAGHR
ISAGAIEESVLSHGTVADCAVVGKEDPLKGHVPLALCVLKKDVNASEEQVLEEIVKHVRQSIGPVAAFRN
AVFVKQLPKTRSGKIPRSTLSALVNGKPYKVTPTIEDPSIFGHIEEVLKQAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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