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Report for CCDS48062.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48062.1 Public Homo sapiens 9 NDOR1 24 110 108 CCDS HistoryNCBI Gene:27158Re-query CCDS DB by CCDS ID:48062.1Re-query CCDS DB by GeneID:27158See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48062.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458322.2 ENSP00000389905.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000458322.2Link to Ensembl Protein Viewer:ENSP00000389905.1Re-query CCDS DB by Nucleotide ID:ENST00000458322Re-query CCDS DB by Protein ID:ENSP00000389905
Original member Current member NCBI NM_001144028.3 NP_001137500.1 Accepted alive Link to Nucleotide Sequence:NM_001144028.3Link to Protein Sequence:NP_001137500.1Re-query CCDS DB by Nucleotide ID:NM_001144028Re-query CCDS DB by Protein ID:NP_001137500Link to BLAST:NP_001137500.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137500.1 590 Q9UHB4-4 590 100% 0 0

Chromosomal Locations for CCDS 48062.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 137205778 137205912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137206232 137206309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137212502 137212599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137213780 137213878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137213967 137214068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137214204 137214413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137214570 137214691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137214798 137215018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137215095 137215202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137215428 137215521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137215659 137215805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137215899 137216017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137216094 137216188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 137216272 137216416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1773 nt):
ATGCCGAGCCCGCAGCTTCTGGTGCTCTTCGGCAGCCAGACAGGCACGGCTCAGGATGTGTCGGAGAGAC
TGGGTCGCGAGGCCCGGCGCCGGCGGCTTGGCTGCCGGGTGCAGGCCCTGGACTCCTACCCGGTGGTGAA
TCTGATTAACGAGCCCCTGGTGATATTTGTTTGTGCAACTACAGGCCAAGGAGACCCCCCTGACAACATG
AAGAACTTCTGGAGGTTTATATTCCGGAAGAACCTGCCCTCCACTGCCCTCTGTCAGATGGACTTTGCCG
TCCTGGGCCTCGGGGACTCCTCATACGCCAAGTTCAACTTCGTGGCCAAGAAGCTGCACCGACGGCTACT
GCAGCTTGGGGGCAGCGCCCTCCTGCCCGTGTGCCTGGGCGATGACCAGCATGAGCTGGGGCCCGACGCT
GCTGTGGACCCCTGGCTGCGAGACTTGTGGGACAGGGTTCTGGGGCTGTACCCGCCGCCTCCGGGCCTCA
CTGAGATCCCTCCCGGAGTCCCCCTGCCCTCCAAGTTCACCCTGCTGTTCCTCCAAGAGGCACCCAGCAC
GGGCTCTGAGGGGCAGCGGGTAGCTCACCCCGGCTCTCAGGAGCCCCCGTCAGAGTCGAAGCCCTTCCTA
GCACCCATGATCTCCAACCAGAGAGTCACCGGCCCCTCCCACTTCCAGGACGTTCGGCTGATTGAGTTTG
ACATCTTGGGCTCTGGCATCAGCTTTGCTGCTGGTGATGTGGTGCTGATTCAGCCCTCCAACTCGGCTGC
CCATGTCCAGCGGTTCTGCCAGGTGCTGGGCCTGGACCCTGACCAGCTCTTCATGCTGCAGCCGCGGGAG
CCAGATGTCTCCTCCCCCACGAGGCTGCCCCAGCCCTGCTCCATGCGGCACCTCGTGTCCCACTACCTGG
ACATCGCCAGCGTGCCTCGCCGCTCCTTCTTCGAACTCCTGGCCTGTCTATCCCTCCATGAGCTGGAGCG
GGAGAAGCTGCTGGAGTTCAGTTCTGCCCAAGGCCAGGAGGAGCTCTTTGAATACTGCAACCGGCCCCGC
AGGACCATCCTGGAGGTGCTCTGTGACTTCCCGCACACAGCTGCCGCCATCCCTCCCGACTACCTGTTGG
ACCTCATCCCCGTTATCCGGCCGAGGGCCTTCTCCATCGCCTCCTCGCTGCTGATCCTCGTGGCTGTAGT
GCAGTTCCAGACTCGCCTCAAGGAGCCCCGCCGGGGCCTCTGCTCCTCCTGGCTGGCATCCCTGGACCCT
GGGCAAGGACCTGTCCGGGTGCCCCTCTGGGTGCGGCCTGGGAGTCTGGCCTTCCCAGAGACACCAGACA
CACCTGTGATCATGGTGGGGCCTGGCACTGGGGTAGCCCCCTTCCGAGCAGCCATCCAGGAGCGTGTGGC
CCAGGGCCAGACTGGAAACTTCTTGTTTTTTGGCTGCCGCTGGCGGGACCAAGACTTCTACTGGGAGGCT
GAGTGGCAGGAGCTGGAGAAGCGGGACTGTCTGACCCTCATCCCTGCCTTCTCCCGGGAACAGGAGCAGA
AAGTATATGTGCAGCACCGGCTCCGGGAGCTGGGGTCGCTTGTGTGGGAACTGCTGGACCGCCAGGGTGC
ATACTTCTACCTGGCAGGCAACGCCAAGTCCATGCCAGCGGACGTCTCGGAAGCCCTGATGTCCATCTTC
CAGGAGGAGGGTGGACTCTGCAGCCCGGACGCAGCCGCGTATCTAGCCAGGCTCCAGCAGACACGGCGCT
TCCAGACAGAGACGTGGGCCTGA

Translation (590 aa):
MPSPQLLVLFGSQTGTAQDVSERLGREARRRRLGCRVQALDSYPVVNLINEPLVIFVCATTGQGDPPDNM
KNFWRFIFRKNLPSTALCQMDFAVLGLGDSSYAKFNFVAKKLHRRLLQLGGSALLPVCLGDDQHELGPDA
AVDPWLRDLWDRVLGLYPPPPGLTEIPPGVPLPSKFTLLFLQEAPSTGSEGQRVAHPGSQEPPSESKPFL
APMISNQRVTGPSHFQDVRLIEFDILGSGISFAAGDVVLIQPSNSAAHVQRFCQVLGLDPDQLFMLQPRE
PDVSSPTRLPQPCSMRHLVSHYLDIASVPRRSFFELLACLSLHELEREKLLEFSSAQGQEELFEYCNRPR
RTILEVLCDFPHTAAAIPPDYLLDLIPVIRPRAFSIASSLLILVAVVQFQTRLKEPRRGLCSSWLASLDP
GQGPVRVPLWVRPGSLAFPETPDTPVIMVGPGTGVAPFRAAIQERVAQGQTGNFLFFGCRWRDQDFYWEA
EWQELEKRDCLTLIPAFSREQEQKVYVQHRLRELGSLVWELLDRQGAYFYLAGNAKSMPADVSEALMSIF
QEEGGLCSPDAAAYLARLQQTRRFQTETWA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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