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Report for CCDS48013.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48013.1 Public Homo sapiens 9 MRRF 24 110 108 CCDS HistoryNCBI Gene:92399Re-query CCDS DB by CCDS ID:48013.1Re-query CCDS DB by GeneID:92399See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48013.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373723.9 ENSP00000362828.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000373723.9Link to Ensembl Protein Viewer:ENSP00000362828.4Re-query CCDS DB by Nucleotide ID:ENST00000373723Re-query CCDS DB by Protein ID:ENSP00000362828
Original member Current member EBI ENST00000394315.3 ENSP00000377850.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394315.3Link to Ensembl Protein Viewer:ENSP00000377850.3Re-query CCDS DB by Nucleotide ID:ENST00000394315Re-query CCDS DB by Protein ID:ENSP00000377850
Original member Current member NCBI NM_199177.4 NP_954646.1 Accepted alive Link to Nucleotide Sequence:NM_199177.4Link to Protein Sequence:NP_954646.1Re-query CCDS DB by Nucleotide ID:NM_199177Re-query CCDS DB by Protein ID:NP_954646Link to BLAST:NP_954646.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_954646.1 201 Q96E11-2 201 100% 0 0

Chromosomal Locations for CCDS 48013.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 122270892 122271075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 122280443 122280598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 122285169 122285287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 122291749 122291840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 122322540 122322594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (606 nt):
ATGGCCTTGGGATTAAAGTGCTTCCGCATGGTCCACCCTACCTTTCGCAATTATCTTGCAGCCTCTATCA
GACCCGTTTCAGAAGTTACACTGAAGACAGTGCATGAAAGACAACATGGCCATAGGCAATACATGGCCTA
TTCAGCTGTACCAGTCCGCCATTTTGCTACCAAGAAAGCCAAAGCCAAAGGGAAAGGACAGTCCCAAACC
AGAGTGAATATTAATGCTGCCTTGGTTGAGGATATAATCAACTTGGAAGAGGTGAATGAAGAAATGAAGT
CTGTGATAGAAGCTCTCAAGGATAATTTCAATAAGACTCTCAATATAAGGACCTCACCAGGATCCCTTGA
CAAGATTGCTGTGGTAACTGCTGACGGGAAGCTTGCTTTAAACCAGATTAGCCAGATCTCCATGAAGTCG
CCACAGCTGATTTTGGTGAATATGGCCAGCTTCCCAGAGTGTACAGCTGCAGCTATCAAGGCTATAAGAG
AAAGTGGAATGAATCTGAACCCAGAAGTGGAAGGGACGCTAATTCGGGTACCCATTCCCCAATCAGCCAA
ATGGCCGATGACACAGTGGCAGAACTGGACAGGCATCTGGCAGTGA

Translation (201 aa):
MALGLKCFRMVHPTFRNYLAASIRPVSEVTLKTVHERQHGHRQYMAYSAVPVRHFATKKAKAKGKGQSQT
RVNINAALVEDIINLEEVNEEMKSVIEALKDNFNKTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKS
PQLILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQSAKWPMTQWQNWTGIWQ


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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