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Report for CCDS46369.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46369.1 Public Homo sapiens 2 INPP4A 24 110 108 CCDS HistoryNCBI Gene:3631Re-query CCDS DB by CCDS ID:46369.1Re-query CCDS DB by GeneID:3631See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46369.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000074304.9 ENSP00000074304.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000074304.9Link to Ensembl Protein Viewer:ENSP00000074304.5Re-query CCDS DB by Nucleotide ID:ENST00000074304Re-query CCDS DB by Protein ID:ENSP00000074304
Original member Current member EBI ENST00000523221.1 ENSP00000427722.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523221.1Link to Ensembl Protein Viewer:ENSP00000427722.1Re-query CCDS DB by Nucleotide ID:ENST00000523221Re-query CCDS DB by Protein ID:ENSP00000427722
Original member Current member NCBI NM_001134224.2 NP_001127696.1 Accepted alive Link to Nucleotide Sequence:NM_001134224.2Link to Protein Sequence:NP_001127696.1Re-query CCDS DB by Nucleotide ID:NM_001134224Re-query CCDS DB by Protein ID:NP_001127696Link to BLAST:NP_001127696.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001127696.1 977 Q96PE3-1 977 100% 0 0

Chromosomal Locations for CCDS 46369.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 98520049 98520154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98520687 98520731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98533377 98533495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98535729 98535845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98536129 98536208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98537863 98537974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98538891 98538981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98539528 98539675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98543877 98544007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98545969 98546073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98546586 98546694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98548955 98548969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98552786 98552969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98554271 98554489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98555553 98555808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98559463 98559495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98563465 98563637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98564640 98564763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98565640 98565766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98566029 98566169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98568571 98568668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98572815 98572927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98576989 98577143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 98587476 98587608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2934 nt):
ATGACAGCAAGAGAGCACAGCCCTCGCCATGGTGCCAGGGCCCGTGCAATGCAGCGGGCTTCCACCATCG
ACGTGGCGGCCGACATGCTGGGCCTCTCTCTGGCAGGAAATATACAAGACCCAGATGAGCCCATTTTAGA
ATTTAGCTTAGCTTGCAGTGAGCTGCATACTCCATCGCTAGATCGAAAGCCAAATAGTTTTGTTGCGGTG
AGTGTCACCACCCCTCCTCAGGCATTCTGGACGAAGCATGCACAGACGGAGATCATTGAGGGAACCAACA
ATCCTATATTTCTAAGCAGTATTGCCTTCTTTCAAGACTCTCTTATCAATCAGATGACACAAGTCAAACT
CTCCGTGTATGATGTCAAAGATAGATCTCAGGGAACAATGTATTTACTGGGCTCTGGAACGTTCATTGTC
AAAGATCTGCTCCAGGACAGGCATCATAGGTTGCATTTAACACTAAGGTCTGCAGAGAGTGACCGTGTAG
GTAACATCACCGTGATTGGCTGGCAGATGGAGGAGAAGTCAGACCAACGGCCCCCTGTGACCCGGTCTGT
GGACACTGTCAATGGGAGGATGGTTCTTCCTGTCGATGAGAGCTTGACGGAGGCGTTAGGAATCCGATCC
AAATACGCTTCATTGCGAAAGGACACTTTGCTGAAATCGGTGTTCGGTGGTGCCATCTGCCGCATGTACC
GGTTTCCAACCACTGATGGTAACCATTTGCGGATCCTGGAGCAGATGGCAGAGAGCGTGCTCTCCCTGCA
CGTGCCCCGGCAGTTCGTGAAGCTCCTACTAGAGGAAGATGCAGCCAGAGTGTGTGAGCTGGAGGAGCTG
GGAGAGCTGTCCCCTTGCTGGGAGAGCCTCCGGCGCCAAATTGTCACCCAGTACCAGACCATCATCCTCA
CATACCAGGAGAACCTGACCGACCTCCATCAGTACAGAGGGCCCTCGTTTAAAGCAAGCAGTTTGAAAGC
AGATAAAAAGTTAGAATTTGTTCCCACAAACTTGCACATACAAAGGATGAGAGTTCAAGACGATGGAGGA
TCAGATCAGAACTACGACATCGTCACCATTGGGGCGCCAGCAGCACACTGCCAAGGTTTTAAGTCAGGAG
GTCTCCGCAAAAAGCTGCACAAATTTGAAGAGACCAAGAAACATTTTGAGGAGTGTTGTACATCATCTGG
CTGCCAGTCCATAATCTACATACCCCAGGATGTTGTCAGAGCCAAGGAGATCATCGCCCAGATCAACACC
CTGAAAACCCAAGTGAGTTACTACGCAGAGCGGCTGTCAAGGGCAGCCAAGGACAGGTCTGCCACTGGCC
TTGAGAGGACACTCGCCATCTTGGCAGACAAGACACGGCAGCTGGTCACGGTCTGCGACTGCAAGCTCCT
GGCCAACTCCATCCATGGGCTGAACGCTGCACGGCCTGACTACATTGCCTCCAAGGCCTCTCCCACTTCG
ACTGAGGAGGAGCAGGTGATGCTTAGAAATGACCAGGACACCCTCATGGCCCGGTGGACAGGGAGAAACA
GCCGATCTTCCCTGCAGGTGGACTGGCACGAGGAGGAGTGGGAGAAAGTGTGGCTGAACGTGGACAAGAG
CCTAGAGTGCATCATTCAGCGTGTGGACAAGCTGCTGCAGAAGGAGCGGCTGCATGGCGAGGGCTGTGAG
GATGTCTTCCCCTGTGCAGGCAGCTGCACCAGCAAGAAAGGTAACCCGGACAGCCACGCCTACTGGATCA
GACCAGAAGACCCCTTCTGTGATGTCCCCTCCTCACCATGCCCCTCCACCATGCCCTCCACTGCATGCCA
TCCTCATCTGACCACACATTGCAGTCCCCCTCCTGAAGAGTCCAGCCCAGGTGAATGGAGTGAGGCCCTT
TACCCGCTGCTGACCACTCTCACCGACTGCGTGGCCATGATGAGTGACAAGGCCAAGAAGGCCATGGTAT
TCCTGCTCATGCAGGACAGCGCGCCCACCATAGCCACCTACCTGAGCCTGCAGTACCGCCGTGACGTGGT
CTTCTGCCAGACGCTGACCGCCCTCATCTGCGGCTTCATCATTAAGCTGAGGAACTGCCTGCATGACGAC
GGCTTCCTGCGCCAGCTCTACACCATCGGGCTGCTGGCCCAGTTCGAGAGCCTGCTGAGCACCTACGGGG
AGGAGCTGGCAATGCTGGAGGACATGAGCCTTGGGATCATGGACTTGAGGAACGTGACCTTCAAAGTCAC
TCAGGCCACTTCCAGCGCCTCCGCAGACATGCTGCCCGTCATCACAGGAAATCGCGACGGGTTTAACGTG
CGGGTCCCTCTGCCGGGCCCGCTGTTTGACGCCTTGCCCCGGGAGATCCAGAGTGGCATGCTGCTGCGAG
TGCAGCCCGTCCTCTTCAACGTGGGCATCAATGAGCAGCAGACACTGGCCGAGAGGTTTGGCGATACGTC
TTTACAAGAAGTCATCAACGTGGAGAGTTTGGTGCGGTTAAATTCCTACTTTGAGCAGTTTAAGGAAGTT
TTGCCTGAGGATTGCCTGCCTCGGTCTCGCAGTCAGACGTGCCTGCCAGAGCTGCTGCGGTTTCTGGGTC
AGAACGTGCATGCCCGGAAGAATAAGAACGTCGACATTCTCTGGCAAGCTGCTGAGATCTGCCGCCGCCT
TAATGGGGTCCGGTTCACCAGCTGCAAGAGCGCTAAGGACCGTACAGCCATGTCGGTGACACTGGAGCAG
TGCCTGATCCTGCAACACGAGCATGGCATGGCCCCGCAGGTCTTCACCCAGGCCCTGGAGTGCATGCGCA
GTGAGGGTTGTCGAAGAGAAAATACAATGAAGAATGTTGGAAGTCGCAAATATGCATTTAATTCCCTGCA
GCTGAAGGCTTTCCCCAAGCATTACAGGCCTCCCGAAGGGACTTACGGAAAAGTTGAAACGTGA

Translation (977 aa):
MTAREHSPRHGARARAMQRASTIDVAADMLGLSLAGNIQDPDEPILEFSLACSELHTPSLDRKPNSFVAV
SVTTPPQAFWTKHAQTEIIEGTNNPIFLSSIAFFQDSLINQMTQVKLSVYDVKDRSQGTMYLLGSGTFIV
KDLLQDRHHRLHLTLRSAESDRVGNITVIGWQMEEKSDQRPPVTRSVDTVNGRMVLPVDESLTEALGIRS
KYASLRKDTLLKSVFGGAICRMYRFPTTDGNHLRILEQMAESVLSLHVPRQFVKLLLEEDAARVCELEEL
GELSPCWESLRRQIVTQYQTIILTYQENLTDLHQYRGPSFKASSLKADKKLEFVPTNLHIQRMRVQDDGG
SDQNYDIVTIGAPAAHCQGFKSGGLRKKLHKFEETKKHFEECCTSSGCQSIIYIPQDVVRAKEIIAQINT
LKTQVSYYAERLSRAAKDRSATGLERTLAILADKTRQLVTVCDCKLLANSIHGLNAARPDYIASKASPTS
TEEEQVMLRNDQDTLMARWTGRNSRSSLQVDWHEEEWEKVWLNVDKSLECIIQRVDKLLQKERLHGEGCE
DVFPCAGSCTSKKGNPDSHAYWIRPEDPFCDVPSSPCPSTMPSTACHPHLTTHCSPPPEESSPGEWSEAL
YPLLTTLTDCVAMMSDKAKKAMVFLLMQDSAPTIATYLSLQYRRDVVFCQTLTALICGFIIKLRNCLHDD
GFLRQLYTIGLLAQFESLLSTYGEELAMLEDMSLGIMDLRNVTFKVTQATSSASADMLPVITGNRDGFNV
RVPLPGPLFDALPREIQSGMLLRVQPVLFNVGINEQQTLAERFGDTSLQEVINVESLVRLNSYFEQFKEV
LPEDCLPRSRSQTCLPELLRFLGQNVHARKNKNVDILWQAAEICRRLNGVRFTSCKSAKDRTAMSVTLEQ
CLILQHEHGMAPQVFTQALECMRSEGCRRENTMKNVGSRKYAFNSLQLKAFPKHYRPPEGTYGKVET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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