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Report for CCDS45817.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45817.1 Public Homo sapiens 17 CYBC1 22 109 92 CCDS HistoryNCBI Gene:79415Re-query CCDS DB by CCDS ID:45817.1Re-query CCDS DB by GeneID:79415See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45817.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434650.6 ENSP00000401626.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434650.6Link to Ensembl Protein Viewer:ENSP00000401626.2Re-query CCDS DB by Nucleotide ID:ENST00000434650Re-query CCDS DB by Protein ID:ENSP00000401626
Original member Current member EBI ENST00000577436.5 ENSP00000464633.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000577436.5Link to Ensembl Protein Viewer:ENSP00000464633.1Re-query CCDS DB by Nucleotide ID:ENST00000577436Re-query CCDS DB by Protein ID:ENSP00000464633
Original member NCBI NM_001100408.2 NP_001093878.1 Updated not alive Link to Nucleotide Sequence:NM_001100408.2Link to Protein Sequence:NP_001093878.1Re-query CCDS DB by Nucleotide ID:NM_001100408Re-query CCDS DB by Protein ID:NP_001093878
Current member NCBI NM_001100408.3 NP_001093878.1 Accepted alive Link to Nucleotide Sequence:NM_001100408.3Link to Protein Sequence:NP_001093878.1Re-query CCDS DB by Nucleotide ID:NM_001100408Re-query CCDS DB by Protein ID:NP_001093878Link to BLAST:NP_001093878.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093878.1 173 Q9BQA9-2 173 100% 0 0

Chromosomal Locations for CCDS 45817.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 82444004 82444124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82444447 82444591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82445864 82445960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82446623 82446696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 82449170 82449254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (522 nt):
ATGTACCTGCAGGTGGAGACCCGCACCAGCTCCCGCCTCCATCTGAAGAGGGCTCCAGGCATCCGGTCCT
GG
TCCCTGCTGGTTGATAGCCTGGGCTGGAAGCTCTTCTACGTCACAGGCTGCCTGTTTGTGGCTGTGCA
G
AACTTGGAGGACTGGGAGGAAGCCATCTTCGACAAGAGCACAGGGAAGGTTGTTTTGAAGACGTTCAGC
CTC
TACAAGAAGCTGCTGACTCTTTTCAGAGCTGGCCACGACCAGGTGGTGGTCCTGCTCCATGATGTCC
GT
GATGTGAGCGTGGAGGAGGAGAAGGTCCGGTACTTCGGGAAAGGCTACATGGTGGTGCTCCGGCTTGC
G
ACGGGCTTCTCCCACCCCCTCACGCAGAGTGCAGTCATGGGCCACCGCAGTGATGTGGAAGCCATCGCC
AAG
CTCATCACCAGCTTCCTGGAGCTGCACTGCCTTGAGAGCCCCACAGAGCTGTCTCAGAGCAGCGACA
GT
GAGGCCGGTGACCCTGCAAGCCAGAGCTGA


Translation (173 aa):
MYLQVETRTSSRLHLKRAPGIRSWSLLVDSLGWKLFYVTGCLFVAVQNLEDWEEAIFDKSTGKVVLKTFS
L
YKKLLTLFRAGHDQ
VVVLLHDVRDVSVEEEKVRYFGKGYMVVLRLATGFSHPLTQSAVMGHRSDVEAIA
K
LITSFLELHCLESPTELSQSSDSEAGDPASQS




Links Key
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 Genome Browser Links:   Ensembl Genome Browser
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