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Report for CCDS45726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45726.1 Public Homo sapiens 17 PHOSPHO1 22 109 92 CCDS HistoryNCBI Gene:162466Re-query CCDS DB by CCDS ID:45726.1Re-query CCDS DB by GeneID:162466See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45726.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000413580.5 ENSP00000406909.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000413580.5Link to Ensembl Protein Viewer:ENSP00000406909.1Re-query CCDS DB by Nucleotide ID:ENST00000413580Re-query CCDS DB by Protein ID:ENSP00000406909
Original member Current member EBI ENST00000514112.1 ENSP00000427694.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000514112.1Link to Ensembl Protein Viewer:ENSP00000427694.1Re-query CCDS DB by Nucleotide ID:ENST00000514112Re-query CCDS DB by Protein ID:ENSP00000427694
Original member NCBI NM_001143804.1 NP_001137276.1 Updated not alive Link to Nucleotide Sequence:NM_001143804.1Link to Protein Sequence:NP_001137276.1Re-query CCDS DB by Nucleotide ID:NM_001143804Re-query CCDS DB by Protein ID:NP_001137276
Current member NCBI NM_001143804.2 NP_001137276.1 Accepted alive Link to Nucleotide Sequence:NM_001143804.2Link to Protein Sequence:NP_001137276.1Re-query CCDS DB by Nucleotide ID:NM_001143804Re-query CCDS DB by Protein ID:NP_001137276Link to BLAST:NP_001137276.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001137276.1 292 Q8TCT1-3 292 100% 0 0

Chromosomal Locations for CCDS 45726.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 49224246 49225124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGTGCCAGCGCCTCTGGCCGTGGCCCGCTAACCAGCCTCTCCCGGGCGGGCTCCTGCCGCGCCCCCTCT
CG
CTTGCCCCCTCCTCCTCCTCCTCCTGCTGCTCTCCCCCCTGCTCCCAGGACGGCAGGATGGCCGCGCA
G
GGCGCGCCGCGCTTCCTCCTGACCTTCGACTTCGACGAGACTATCGTGGACGAAAACAGCGACGATTCG
ATC
GTGCGCGCCGCGCCGGGCCAGCGGCTCCCGGAGAGCCTGCGAGCCACCTACCGCGAGGGCTTCTACA
AC
GAGTACATGCAGCGCGTCTTCAAGTACCTGGGCGAGCAGGGCGTGCGGCCGCGGGACCTGAGCGCCAT
C
TACGAAGCCATCCCTTTGTCGCCAGGCATGAGCGACCTGCTGCAGTTTGTGGCAAAACAGGGCGCCTGC
TTC
GAGGTGATTCTCATCTCCGATGCCAACACCTTTGGCGTGGAGAGCTCGCTGCGCGCCGCCGGCCACC
AC
AGCCTGTTCCGCCGCATCCTCAGCAACCCGTCGGGGCCGGATGCGCGGGGACTGCTGGCTCTGCGGCC
G
TTCCACACACACAGCTGCGCGCGCTGCCCCGCCAACATGTGCAAGCACAAGGTGCTCAGCGACTACCTG
CGC
GAGCGGGCCCACGACGGCGTGCACTTCGAGCGCCTCTTCTACGTGGGCGACGGCGCCAACGACTTCT
GC
CCCATGGGGCTGCTGGCGGGCGGCGACGTGGCCTTCCCGCGCCGCGGCTACCCCATGCACCGCCTCAT
T
CAGGAGGCCCAGAAGGCCGAGCCCAGCTCGTTCCGCGCCAGCGTGGTGCCCTGGGAAACGGCTGCAGAT
GTG
CGCCTCCACCTGCAACAGGTGCTGAAGTCGTGCTGA


Translation (292 aa):
MCQRLWPWPANQPLPGGLLPRPLSLAPSSSSSCCSPPCSQDGRMAAQGAPRFLLTFDFDETIVDENSDDS
I
VRAAPGQRLPESLRATYREGFYNEYMQRVFKYLGEQGVRPRDLSAIYEAIPLSPGMSDLLQFVAKQGAC
F
EVILISDANTFGVESSLRAAGHHSLFRRILSNPSGPDARGLLALRPFHTHSCARCPANMCKHKVLSDYL
R
ERAHDGVHFERLFYVGDGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRASVVPWETAAD
V
RLHLQQVLKSC




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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  UCSC Genome Browser
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