NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45314.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45314.1 Public Homo sapiens 15 TBC1D2B 24 110 108 CCDS HistoryNCBI Gene:23102Re-query CCDS DB by CCDS ID:45314.1Re-query CCDS DB by GeneID:23102See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45314.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300584.8 ENSP00000300584.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300584.8Link to Ensembl Protein Viewer:ENSP00000300584.3Re-query CCDS DB by Nucleotide ID:ENST00000300584Re-query CCDS DB by Protein ID:ENSP00000300584
Original member Current member NCBI NM_144572.2 NP_653173.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144572.2Link to Protein Sequence:NP_653173.1Re-query CCDS DB by Nucleotide ID:NM_144572Re-query CCDS DB by Protein ID:NP_653173Link to BLAST:NP_653173.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653173.1 963 Q9UPU7-1 963 100% 0 0

Chromosomal Locations for CCDS 45314.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 77998160 77998355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78001619 78001740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78003305 78003490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78008997 78009114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78012823 78013317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78016546 78016739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78017847 78017957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78024156 78024539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78025259 78025497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78030007 78030170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78044900 78045068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78054034 78054187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78077293 78077652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2892 nt):
ATGCCGGGGGCCGGAGCCCGGGCGGAGGAGGGCGGCGGCGGCGGCGAGGGCGCGGCGCAGGGGGCGGCCG
CGGAGCCCGGGGCGGGTCCGGCGCGGGAGCCAGCGCGGCTGTGTGGCTATCTGCAGAAGCTGTCGGGCAA
GGGCCCCCTGCGTGGCTACCGCAGCCGCTGGTTCGTGTTCGACGCGCGCCGCTGCTACCTTTACTATTTC
AAGAGTCCGCAGGACGCGCTGCCCCTCGGCCACTTGGACATCGCGGACGCCTGCTTCAGCTACCAGGGCC
CCGACGAGGCGGCGGAGCCGGGCACGGAGCCGCCCGCGCACTTCCAGGTGCACAGCGCGGGAGCCGTCAC
GGTGCTCAAGGCTCCCAATCGTCAACTCATGACTTACTGGTTACAGGAGCTTCAGCAGAAGAGATGGGAA
TATTGTAACAGTCTTGACATGGTCAAGTGGGACAGCAGGACCTCTCCAACTCCCGGGGATTTTCCTAAGG
GTCTTGTAGCCAGAGATAACACTGATTTAATTTACCCACACCCAAATGCTTCTGCAGAAAAAGCCAGAAA
TGTCCTAGCTGTGGAGACTGTGCCTGGAGAGCTGGTGGGAGAACAAGCTGCAAATCAGCCCGCCCCAGGG
CATCCAAATTCCATTAATTTTTACTCTTTGAAACAGTGGGGCAATGAGCTCAAGAATTCGATGTCTTCTT
TCCGTCCTGGGAGAGGACATAATGATAGTCGGAGGACTGTGTTTTATACCAATGAAGAGTGGGAACTTTT
AGACCCAACCCCTAAGGACCTAGAGGAGTCCATAGTACAGGAAGAAAAGAAGAAGCTGACCCCTGAAGGA
AACAAAGGAGTAACTGGCTCAGGATTCCCCTTTGATTTTGGACGTAACCCCTACAAAGGAAAGCGCCCTT
TGAAAGACATAATTGGGTCGTACAAAAATCGTCACAGCAGTGGTGACCCTTCAAGTGAAGGCACATCAGG
CAGTGGCAGCGTCAGCATCAGGAAGCCGGCCTCCGAAATGCAACTGCAGGTCCAGAGCCAGCAGGAAGAG
CTGGAACAGTTAAAGAAAGACCTGTCCAGTCAGAAGGAGCTTGTTCGACTGCTCCAGCAGACAGTCCGGT
CATCCCAGTATGACAAGTATTTCACAAGCAGCCGGCTCTGTGAGGGGGTCCCAAAGGACACGCTCGAGCT
TCTGCACCAAAAGGATGATCAGATTCTGGGCCTTACCAGCCAGCTGGAGAGGTTCAGCTTGGAGAAGGAG
AGTCTTCAGCAGGAAGTAAGGACGCTGAAGAGCAAAGTGGGCGAGCTCAACGAGCAGCTGGGAATGCTCA
TGGAGACCATCCAAGCCAAGGACGAGGTCATCATCAAGCTCAGCGAGGGCGAGGGCAACGGGCCTCCTCC
CACCGTGGCGCCCAGCTCCCCTTCGGTTGTGCCTGTTGCCAGGGACCAGCTGGAACTGGACAGGCTGAAA
GATAATCTACAGGGGTACAAAACCCAAAACAAATTTCTAAATAAGGAGATTTTGGAACTCTCAGCTCTAC
GAAGAAATGCAGAAAGGAGAGAGAGGGATCTGATGGCAAAGTATTCTAGCCTGGAAGCCAAGCTCTGCCA
GATAGAAAGTAAATACCTGATATTGCTCCAAGAAATGAAGACACCAGTGTGCTCAGAAGACCAGGGGCCC
ACCCGGGAGGTCATAGCCCAGTTGCTGGAGGATGCTCTGCAGGTTGAGAGCCAAGAGCAGCCGGAGCAAG
CATTTGTTAAACCTCATCTTGTCAGTGAATATGATATTTATGGGTTCAGGACTGTACCTGAGGATGATGA
GGAAGAGAAATTGGTTGCCAAGGTCCGCGCGTTGGATCTGAAGACTCTCTACCTCACAGAAAACCAGGAA
GTCTCCACTGGGGTCAAGTGGGAAAACTATTTTGCAAGTACAGTGAACAGGGAGATGATGTGCTCTCCAG
AGTTAAAAAACCTCATCCGTGCGGGCATTCCCCACGAGCACCGTTCCAAGGTGTGGAAGTGGTGTGTGGA
CCGTCACACCAGGAAGTTCAAGGACAACACTGAGCCTGGCCACTTCCAGACCTTGCTGCAGAAGGCGCTG
GAGAAACAGAACCCAGCCTCCAAGCAGATTGAGCTGGACTTGCTGCGAACTCTGCCCAACAACAAACATT
ACTCCTGCCCCACCTCAGAAGGCATACAGAAGTTACGCAATGTCCTCCTCGCCTTCTCCTGGCGGAATCC
AGATATCGGCTACTGTCAAGGCCTAAACAGGTTGGTGGCAGTGGCCCTCCTGTACCTGGAACAAGAAGAT
GCTTTCTGGTGTCTCGTTACCATAGTGGAAGTTTTCATGCCTCGAGACTATTATACAAAGACTCTTTTAG
GATCCCAGGTGGACCAGCGGGTGTTCAGAGACCTTATGAGTGAGAAGCTGCCTCGGTTGCATGGCCACTT
TGAACAGTACAAAGTCGACTACACTCTCATCACTTTCAACTGGTTTCTGGTGGTATTTGTGGATAGTGTC
GTTAGTGACATCCTCTTTAAAATATGGGACTCTTTCCTTTATGAAGGACCAAAGGTTATTTTCCGTTTTG
CTCTGGCACTTTTTAAGTACAAGGAAGAGGAGATTTTGAAATTGCAAGATTCGATGTCTATATTTAAGTA
TCTCCGCTACTTCACTCGCACTATCCTTGATGCTAGGAAGCTGATCAGTATCTCCTTTGGGGACCTGAAC
CCTTTCCCCCTACGCCAGATCCGGAACCGACGCGCCTACCACTTGGAGAAAGTCCGGCTGGAGCTGACCG
AGCTGGAGGCCATCCGTGAGGACTTCCTGCGTGAGCGGGACACCAGCCCTGACAAGGGTGAGCTGGTCAG
TGACGAGGAGGAGGATACCTGA

Translation (963 aa):
MPGAGARAEEGGGGGEGAAQGAAAEPGAGPAREPARLCGYLQKLSGKGPLRGYRSRWFVFDARRCYLYYF
KSPQDALPLGHLDIADACFSYQGPDEAAEPGTEPPAHFQVHSAGAVTVLKAPNRQLMTYWLQELQQKRWE
YCNSLDMVKWDSRTSPTPGDFPKGLVARDNTDLIYPHPNASAEKARNVLAVETVPGELVGEQAANQPAPG
HPNSINFYSLKQWGNELKNSMSSFRPGRGHNDSRRTVFYTNEEWELLDPTPKDLEESIVQEEKKKLTPEG
NKGVTGSGFPFDFGRNPYKGKRPLKDIIGSYKNRHSSGDPSSEGTSGSGSVSIRKPASEMQLQVQSQQEE
LEQLKKDLSSQKELVRLLQQTVRSSQYDKYFTSSRLCEGVPKDTLELLHQKDDQILGLTSQLERFSLEKE
SLQQEVRTLKSKVGELNEQLGMLMETIQAKDEVIIKLSEGEGNGPPPTVAPSSPSVVPVARDQLELDRLK
DNLQGYKTQNKFLNKEILELSALRRNAERRERDLMAKYSSLEAKLCQIESKYLILLQEMKTPVCSEDQGP
TREVIAQLLEDALQVESQEQPEQAFVKPHLVSEYDIYGFRTVPEDDEEEKLVAKVRALDLKTLYLTENQE
VSTGVKWENYFASTVNREMMCSPELKNLIRAGIPHEHRSKVWKWCVDRHTRKFKDNTEPGHFQTLLQKAL
EKQNPASKQIELDLLRTLPNNKHYSCPTSEGIQKLRNVLLAFSWRNPDIGYCQGLNRLVAVALLYLEQED
AFWCLVTIVEVFMPRDYYTKTLLGSQVDQRVFRDLMSEKLPRLHGHFEQYKVDYTLITFNWFLVVFVDSV
VSDILFKIWDSFLYEGPKVIFRFALALFKYKEEEILKLQDSMSIFKYLRYFTRTILDARKLISISFGDLN
PFPLRQIRNRRAYHLEKVRLELTELEAIREDFLRERDTSPDKGELVSDEEEDT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH