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Gene
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RefSeq
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Report for CCDS45133.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
45133.1 |
Public |
Homo sapiens |
14 |
DPF3 |
24 |
110 |
108 |
          |
Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Nonsense-mediated decay (NMD) candidate |
Sequence IDs included in CCDS 45133.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
 |
 |
EBI |
ENST00000381216.8 |
ENSP00000370614.4 |
|
Accepted |
alive |
      |
 |
 |
NCBI |
NM_012074.5 |
NP_036206.3 |
|
Accepted |
alive |
        |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_036206.3 |
357 |
Q92784-2 |
357 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 45133.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1074 nt): ATGGCGACTGTCATTCACAACCCCCTGAAAGCGCTCGGGGACCAGTTCTACAAGGAAGCCATTGAGCACT GCCGGAGTTACAACTCACGGCTGTGTGCAGAGCGCAGCGTGCGTCTTCCCTTCCTGGACTCACAGACTGG GGTGGCCCAGAACAACTGCTACATCTGGATGGAGAAGAGGCACCGAGGCCCAGGCCTTGCCCCGGGCCAG CTGTATACATACCCTGCCCGCTGCTGGCGCAAGAAGAGACGATTGCACCCACCTGAAGATCCAAAACTGC GGCTGCTGGAGATAAAACCTGAAGTGGAGCTTCCCCTGAAGAAGGATGGGTTCACCTCAGAGAGCACCAC GCTGGAAGCCTTGCTCCGTGGCGAGGGGGTTGAGAAGAAGGTGGATGCCAGGGAGGAGGAAAGCATCCAG GAAATACAGAGGGTTTTGGAAAATGATGAAAATGTAGAAGAAGGGAATGAAGAAGAGGATTTGGAAGAGG ATATTCCCAAGCGAAAGAACAGGACTAGAGGACGGGCTCGCGGCTCTGCAGGGGGCAGGAGGAGGCACGA CGCCGCCTCTCAGGAAGACCACGACAAACCTTACGTCTGTGACATCTGTGGCAAGCGCTACAAGAACCGA CCGGGGCTCAGCTACCACTATGCTCACACTCACCTGGCCAGCGAGGAGGGGGATGAAGCTCAAGACCAGG AGACTCGGTCCCCACCCAACCACAGAAATGAGAACCACAGGCCCCAGAAAGGACCGGATGGAACAGTCAT TCCCAATAACTACTGTGACTTCTGCTTGGGGGGCTCCAACATGAACAAGAAGAGTGGGCGGCCTGAAGAG CTGGTGTCCTGCGCAGACTGTGGACGCTCTGCTCATTTGGGAGGAGAAGGCAGGAAGGAGAAGGAGGCAG CGGCCGCAGCACGTACCACGGAGGACTTATTCGGTTCCACGTCAGAAAGTGACACGTCAACTTTCCACGG CTTTGATGAGGACGATTTGGAAGAGCCTCGCTCCTGTCGAGGACGCCGCAGTGGCCGGGGTTCGCCCACA GCAGATAAAAAGGGCAGTTGCTAA
Translation (357 aa): MATVIHNPLKALGDQFYKEAIEHCRSYNSRLCAERSVRLPFLDSQTGVAQNNCYIWMEKRHRGPGLAPGQ LYTYPARCWRKKRRLHPPEDPKLRLLEIKPEVELPLKKDGFTSESTTLEALLRGEGVEKKVDAREEESIQ EIQRVLENDENVEEGNEEEDLEEDIPKRKNRTRGRARGSAGGRRRHDAASQEDHDKPYVCDICGKRYKNR PGLSYHYAHTHLASEEGDEAQDQETRSPPNHRNENHRPQKGPDGTVIPNNYCDFCLGGSNMNKKSGRPEE LVSCADCGRSAHLGGEGRKEKEAAAAARTTEDLFGSTSESDTSTFHGFDEDDLEEPRSCRGRRSGRGSPT ADKKGSC
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