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Report for CCDS45087.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45087.1 Public Homo sapiens 14 GMPR2 24 110 108 CCDS HistoryNCBI Gene:51292Re-query CCDS DB by CCDS ID:45087.1Re-query CCDS DB by GeneID:51292See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45087.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420554.6 ENSP00000392859.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420554.6Link to Ensembl Protein Viewer:ENSP00000392859.2Re-query CCDS DB by Nucleotide ID:ENST00000420554Re-query CCDS DB by Protein ID:ENSP00000392859
Original member Current member NCBI NM_016576.5 NP_057660.2 Accepted alive Link to Nucleotide Sequence:NM_016576.5Link to Protein Sequence:NP_057660.2Re-query CCDS DB by Nucleotide ID:NM_016576Re-query CCDS DB by Protein ID:NP_057660Link to BLAST:NP_057660.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057660.2 366 Q9P2T1-2 366 100% 0 0

Chromosomal Locations for CCDS 45087.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24233200 24233340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24233479 24233598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24235737 24235820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24235967 24236140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24237071 24237152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24237245 24237351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24237520 24237562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24238246 24238405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24238589 24238778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1101 nt):
ATGACTTCCTGCCTTCCAGCCCTCAGATTCATCGCTACCCCGAGGCTAAGCGCCATGCCTCATATTGACA
AC
GATGTGAAACTGGACTTCAAGGATGTCCTTTTGAGGCCCAAACGCAGTACCCTTAAGTCTCGAAGTGA
G
GTGGATCTCACAAGATCCTTTTCATTTCGGAACTCAAAGCAGACATACTCTGGGGTTCCCATCATTGCT
GCC
AATATGGATACTGTGGGCACCTTTGAGATGGCCAAGGTTCTCTGTAAGTTCTCTCTCTTCACTGCTG
TC
CATAAGCACTATAGCCTCGTTCAGTGGCAAGAGTTTGCTGGCCAGAATCCTGACTGTCTTGAGCATCT
G
GCTGCCAGCTCAGGCACAGGCTCTTCTGACTTTGAGCAGCTGGAACAGATCCTGGAAGCTATTCCCCAG
GTG
AAGTATATATGCCTGGATGTGGCAAATGGCTACTCTGAACACTTTGTTGAATTTGTAAAAGATGTAC
GG
AAGCGCTTCCCCCAGCACACCATCATGGCAGGGAATGTGGTAACAGGAGAGATGGTAGAAGAGCTCAT
C
CTTTCTGGGGCTGACATCATCAAAGTGGGAATTGGGCCAGGCTCTGTGTGTACTACTCGGAAGAAAACT
GGA
GTGGGGTATCCACAGCTCAGCGCAGTGATGGAGTGTGCAGATGCTGCTCATGGCCTCAAAGGCCACA
TC
ATTTCAGATGGAGGTTGCAGCTGTCCTGGGGATGTGGCCAAGGCTTTTGGGGCAGGAGCTGACTTCGT
G
ATGCTGGGTGGCATGCTGGCTGGGCACAGTGAGTCAGGTGGTGAGCTCATCGAGAGGGATGGCAAGAAG
TAC
AAGCTCTTCTATGGAATGAGTTCTGAAATGGCCATGAAGAAGTATGCTGGGGGCGTGGCTGAGTACA
G
A
GCCTCAGAGGGAAAGACAGTGGAAGTTCCTTTTAAAGGAGATGTGGAACATACCATCCGAGACATCCT
A
GGAGGGATCCGCTCTACGTGTACCTATGTGGGAGCAGCTAAGCTCAAAGAGTTGAGCAGGAGAACTACC
TTC
ATCCGAGTCACCCAGCAGGTGAATCCAATCTTCAGTGAGGCGTGCTAG


Translation (366 aa):
MTSCLPALRFIATPRLSAMPHIDNDVKLDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIA
A
NMDTVGTFEMAKVLCK
FSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQ
V
KYICLDVANGYSEHFVEFVKDVRKRFPQHTIM
AGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKT
G
VGYPQLSAVMECADAAHGLKGHIIS
DGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKK
Y
KLFYGMSSEMAMKKYAGGVAEY
RASEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTT
F
IRVTQQVNPIFSEAC




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 Links to:   History report
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 Genome Browser Links:   Ensembl Genome Browser
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