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Report for CCDS44155.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44155.1 Public Homo sapiens 1 FGGY 24 110 108 CCDS HistoryNCBI Gene:55277Re-query CCDS DB by CCDS ID:44155.1Re-query CCDS DB by GeneID:55277See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44155.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371218.8 ENSP00000360262.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371218.8Link to Ensembl Protein Viewer:ENSP00000360262.4Re-query CCDS DB by Nucleotide ID:ENST00000371218Re-query CCDS DB by Protein ID:ENSP00000360262
Original member Current member NCBI NM_001113411.2 NP_001106882.1 Accepted alive Link to Nucleotide Sequence:NM_001113411.2Link to Protein Sequence:NP_001106882.1Re-query CCDS DB by Nucleotide ID:NM_001113411Re-query CCDS DB by Protein ID:NP_001106882Link to BLAST:NP_001106882.1
Original member Current member NCBI NM_001350790.2 NP_001337719.1 Accepted alive Link to Nucleotide Sequence:NM_001350790.2Link to Protein Sequence:NP_001337719.1Re-query CCDS DB by Nucleotide ID:NM_001350790Re-query CCDS DB by Protein ID:NP_001337719Link to BLAST:NP_001337719.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001106882.1 575 Q96C11-3 575 100% 0 0
NP_001337719.1 575 Q96C11-3 575 100% 0 0

Chromosomal Locations for CCDS 44155.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 59321550 59321750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59339958 59340069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59346247 59346398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59378749 59378837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59456961 59457076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59512311 59512439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59554124 59554227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59607803 59607910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59625988 59626049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59638228 59638375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59641280 59641351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59660219 59660293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59667283 59667403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59674039 59674133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59757931 59757992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 59762503 59762584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1728 nt):
ATGTCTGGTGGAGAACAGAAACCAGAGAGGTACTATGTGGGTGTGGACGTTGGAACAGGCAGTGTCCGTG
CAGCTCTGGTGGACCAGAGTGGGGTCCTGTTGGCTTTTGCAGACCAGCCAATTAAGAATTGGGAGCCCCA
GTTCAACCACCATGAGCAGTCCTCCGAGGACATCTGGGCTGCGTGCTGTGTTGTCACAAAGAAAGTTGTA
CAAGGGATTGATTTAAACCAAATTCGAGGACTTGGGTTTGATGCCACGTGTTCTCTGGTTGTTTTGGATA
AGCAGTTTCACCCATTACCAGTCAACCAGGAAGGGGATTCCCATCGAAACGTCATCATGTGGCTGGACCA
TCGAGCAGTCAGTCAAGTTAACAGGATCAATGAGACCAAGCACAGTGTCCTCCAGTACGTCGGGGGGGTG
ATGTCTGTGGAAATGCAGGCCCCGAAACTTCTGTGGCTGAAAGAGAACTTGAGAGAGATTTGCTGGGATA
AGGCGGGACATTTCTTTGATCTCCCGGACTTCTTATCGTGGAAGGCAACAGGTGTCACAGCACGGTCTCT
CTGCTCCCTGGTGTGTAAGTGGACATATTCAGCAGAGAAAGGCTGGGACGACAGTTTCTGGAAAATGATT
GGTTTGGAAGACTTTGTTGCAGATAATTACAGCAAAATAGGAAACCAAGTGCTACCTCCTGGAGCTTCTC
TTGGAAATGGGCTCACACCAGAGGCAGCAAGAGACCTTGGCCTTCTCCCTGGGATTGCGGTCGCAGCTTC
ACTCATTGATGCCCATGCAGGAGGACTAGGAGTGATTGGGGCAGATGTGAGAGGGCACGGCCTCATCTGT
GAGGGGCAGCCAGTGACGTCACGGCTGGCTGTCATCTGTGGAACGTCTTCTTGTCACATGGGGATCAGCA
AAGACCCGATTTTTGTACCAGGCGTCTGGGGGCCTTATTTCTCAGCCATGGTACCTGGGTTCTGGCTGAA
TGAAGGTGGTCAGAGCGTTACTGGAAAATTGATAGACCACATGGTACAAGGCCATGCTGCTTTTCCAGAA
CTACAAGTAAAGGCCACAGCCAGATGCCAGAGTATATATGCATATTTGAACAGTCACCTGGATCTGATTA
AGAAGGCTCAGCCTGTGGGTTTCCTTACTGTTGATTTACATGTTTGGCCAGATTTCCATGGCAACCGGTC
TCCCTTAGCAGATCTGACACTAAAGGGCATGAGAACCACTGGATATCTGTATATTCCGGCTTTGGCAGCG
TTGCACTCTCCCAGTTCTCTACTCTCCCCTCAGGTCACCGGATTGAAACTGTCTCAGGACCTTGATGATC
TTGCCATTCTCTACCTGGCCACAGTTCAAGCCATTGCTTTGGGGACTCGCTTCATTATAGAAGCCATGGA
GGCAGCAGGGCACTCAATCAGTACTCTTTTCCTATGTGGAGGCCTCAGCAAGAATCCCCTTTTTGTGCAA
ATGCATGCGGACATTACTGGCATGCCTGTGGTCCTGTCGCAAGAGGTGGAGTCCGTTCTTGTGGGTGCTG
CTGTTCTGGGTGCCTGTGCCTCAGGGGATTTCGCTTCTGTACAGGAAGCAATGGCAAAAATGAGCAAAGT
TGGGAAAGTTGTGTTCCCGAGACTACAGGATAAAAAATACTATGATAAGAAATACCAAGTATTCCTGAAG
CTGGTTGAACACCAGAAGGAGTATTTGGCGATCATGAATGATGACTGA

Translation (575 aa):
MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWAACCVVTKKVV
QGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAVSQVNRINETKHSVLQYVGGV
MSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKATGVTARSLCSLVCKWTYSAEKGWDDSFWKMI
GLEDFVADNYSKIGNQVLPPGASLGNGLTPEAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLIC
EGQPVTSRLAVICGTSSCHMGISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPE
LQVKATARCQSIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMRTTGYLYIPALAA
LHSPSSLLSPQVTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQ
MHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLK
LVEHQKEYLAIMNDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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