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Report for CCDS43856.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43856.1 Public Homo sapiens 9 ANKS6 24 110 108 CCDS HistoryNCBI Gene:203286Re-query CCDS DB by CCDS ID:43856.1Re-query CCDS DB by GeneID:203286See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43856.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000353234.5 ENSP00000297837.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000353234.5Link to Ensembl Protein Viewer:ENSP00000297837.6Re-query CCDS DB by Nucleotide ID:ENST00000353234Re-query CCDS DB by Protein ID:ENSP00000297837
Original member Current member NCBI NM_173551.5 NP_775822.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173551.5Link to Protein Sequence:NP_775822.3Re-query CCDS DB by Nucleotide ID:NM_173551Re-query CCDS DB by Protein ID:NP_775822Link to BLAST:NP_775822.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775822.3 871 Q68DC2-1 871 100% 0 0

Chromosomal Locations for CCDS 43856.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 98736519 98736623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98745559 98745675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98751029 98751096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98756420 98756603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98768081 98768250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98770896 98771046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98773877 98774080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98777405 98777454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98778226 98778424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98780189 98780337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98782467 98782573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98783953 98784157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98784832 98784876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98790104 98790606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 98796133 98796491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2616 nt):
ATGGGCGAGGGCGGGCTGCCCCCGGCCTTCCAGCTGCTGCTGCGCGCGTGTGACCAGGGCGACACGGAGA
CGGCGCGGCGGCTGCTGGAGCCGGGGGCGGCGGAGCCAGCCGAGCGCGGCGCGGAGCCGGAGGCGGGCGC
GGAGCCGGCGGGGGCCGAGGTGGCCGGGCCCGGGGCCGCAGCGGCGGGGGCAGTCGGGGCTCCGGTGCCC
GTGGATTGCTCGGACGAGGCGGGCAACACCGCACTGCAGTTCGCCGCGGCCGGGGGCCACGAACCGCTGG
TGCGCTTCCTGCTGCGCCGCGGTGCCTCGGTCAACAGCCGCAACCACTACGGCTGGAGCGCGCTCATGCA
GGCGGCCAGATTTGGGCATGTGAGTGTGGCACACCTCCTGTTGGATCACGGGGCTGATGTCAATGCCCAG
AACCGGCTGGGGGCCAGTGTGCTCACTGTGGCTTCTCGGGGCGGCCACCTGGGTGTGGTGAAGCTGCTCC
TGGAAGCCGGTGCCTTTGTGGACCATCACCACCCTTCAGGCGAGCAACTGGGGTTGGGCGGCAGCAGGGA
TGAGCCCTTGGACATCACAGCCCTGATGGCTGCCATCCAGCACGGGCACGAGGCCGTGGTGCGTCTACTG
ATGGAGTGGGGCGCGGACCCCAACCACGCAGCCCGGACCGTGGGCTGGAGCCCGCTGATGCTGGCCGCAC
TCACTGGGCGGCTTGGAGTGGCCCAGCAGCTGGTGGAGAAGGGCGCCAACCCTGACCACCTCAGCGTGCT
GGAGAAGACCGCCTTCGAGGTTGCACTGGACTGCAAGCACAGGGACCTTGTAGACTACCTGGACCCGCTG
ACCACCGTCAGGCCCAAAACAGATGAGGAGAAAAGGCGACCTGATATTTTCCATGCATTGAAAATGGGAA
ACTTCCAGCTGGTCAAAGAGATTGCCGATGAAGACCCCAGCCACGTGAACTTGGTCAATGGGGACGGGGC
GACGCCACTGATGCTAGCAGCTGTTACGGGGCAGCTGGCTCTGGTGCAGCTGCTGGTGGAGAGGCACGCG
GATGTTGACAAGCAGGACAGCGTGCATGGCTGGACGGCCCTCATGCAGGCAACCTACCATGGGAATAAGG
AAATTGTGAAATATCTGCTAAACCAAGGGGCCGATGTCACTCTTCGTGCAAAAAATGGATACACGGCCTT
TGACCTGGTGATGCTGCTGAATGATCCCGACACGGAACTTGTTCGACTGCTGGCATCTGTCTGCATGCAG
GTGAATAAAGACAAAGGCCGGCCGAGCCACCAGCCTCCCCTGCCCCACTCGAAGGTCCGACAGCCCTGGA
GCATCCCAGTGCTGCCCGATGACAAGGGTGGACTGAAGTCCTGGTGGAACCGAATGTCCAATCGGTTCCG
AAAGCTCAAACTGATGCAGACGCTGCCCCGTGGGCTGTCCAGCAACCAGCCTTTGCCTTTCTCTGACGAG
CCTGAGCCAGCTCTGGACTCCACAATGAGGGCTGCCCCCCAGGACAAGACAAGCCGCTCTGCACTCCCTG
ATGCGGCCCCTGTGACCAAAGACAATGGTCCTGGGAGCACAAGAGGAGAAAAGGAAGACACGTTATTGAC
AACCATGCTTCGAAACGGAGCTCCCCTCACCAGACTCCCGAGTGACAAGCTGAAAGCAGTCATCCCCCCA
TTCCTACCCCCTTCCAGTTTTGAGCTGTGGAGCTCTGATCGGTCCCGGACGCGTCACAACGGGAAGGCAG
ACCCCATGAAGACTGCGCTGCCCCAGAGAGCCAGCAGGGGCCACCCCGTGGGCGGCGGGGGCACAGACAC
TACACCCGTCAGGCCTGTTAAATTTCCAAGCCTCCCCAGAAGCCCAGCCTCTTCTGCCAATTCTGGAAAC
TTCAACCACTCGCCTCATTCATCGGGCGGCTCCAGTGGGGTAGGTGTGAGCCGGCACGGTGGGGAGCTGC
TTAACCGCTCAGGTGGCAGCATAGACAATGTCTTGTCCCAAATCGCTGCCCAGAGGAAAAAAGCAGCCGG
ATTATTGGAGCAGAAACCCAGCCATCGGTCAAGCCCTGTGGGGCCAGCACCGGGGTCCAGCCCGTCTGAG
CTTCCAGCCTCCCCTGCAGGTGGCAGCGCTCCTGTTGGCAAGAAATTGGAGACCAGCAAAAGGCCTCCAT
CTGGAACTTCCACTACCTCCAAGAGCACCTCTCCAACCCTCACGCCCTCCCCCTCACCCAAAGGGCACAC
TGCAGAGTCCTCAGTGTCTTCCTCGTCATCCCATCGGCAGTCCAAGAGCAGTGGGGGCTCCAGCAGTGGC
ACCATCACAGATGAGGATGAACTGACTGGAATCCTTAAGAAATTATCACTTGAGAAATATCAGCCCATTT
TTGAGGAACAAGAGGTGGACATGGAAGCGTTCCTCACACTGACTGACGGTGACTTGAAGGAGCTGGGAAT
TAAGACAGATGGGTCCAGGCAGCAGATTCTGGCAGCGATTTCTGAACTGAACGCAGGCAAGGGACGCGAG
AGACAAATTTTACAGGAAACCATTCACAACTTTCACTCTTCCTTTGAGAGCAGTGCCAGCAACACCAGGG
CCCCTGGCAACAGCCCCTGTGCGTGA

Translation (871 aa):
MGEGGLPPAFQLLLRACDQGDTETARRLLEPGAAEPAERGAEPEAGAEPAGAEVAGPGAAAAGAVGAPVP
VDCSDEAGNTALQFAAAGGHEPLVRFLLRRGASVNSRNHYGWSALMQAARFGHVSVAHLLLDHGADVNAQ
NRLGASVLTVASRGGHLGVVKLLLEAGAFVDHHHPSGEQLGLGGSRDEPLDITALMAAIQHGHEAVVRLL
MEWGADPNHAARTVGWSPLMLAALTGRLGVAQQLVEKGANPDHLSVLEKTAFEVALDCKHRDLVDYLDPL
TTVRPKTDEEKRRPDIFHALKMGNFQLVKEIADEDPSHVNLVNGDGATPLMLAAVTGQLALVQLLVERHA
DVDKQDSVHGWTALMQATYHGNKEIVKYLLNQGADVTLRAKNGYTAFDLVMLLNDPDTELVRLLASVCMQ
VNKDKGRPSHQPPLPHSKVRQPWSIPVLPDDKGGLKSWWNRMSNRFRKLKLMQTLPRGLSSNQPLPFSDE
PEPALDSTMRAAPQDKTSRSALPDAAPVTKDNGPGSTRGEKEDTLLTTMLRNGAPLTRLPSDKLKAVIPP
FLPPSSFELWSSDRSRTRHNGKADPMKTALPQRASRGHPVGGGGTDTTPVRPVKFPSLPRSPASSANSGN
FNHSPHSSGGSSGVGVSRHGGELLNRSGGSIDNVLSQIAAQRKKAAGLLEQKPSHRSSPVGPAPGSSPSE
LPASPAGGSAPVGKKLETSKRPPSGTSTTSKSTSPTLTPSPSPKGHTAESSVSSSSSHRQSKSSGGSSSG
TITDEDELTGILKKLSLEKYQPIFEEQEVDMEAFLTLTDGDLKELGIKTDGSRQQILAAISELNAGKGRE
RQILQETIHNFHSSFESSASNTRAPGNSPCA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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