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Report for CCDS42982.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42982.1 Public Homo sapiens 22 ZNF74 24 110 108 CCDS HistoryNCBI Gene:7625Re-query CCDS DB by CCDS ID:42982.1Re-query CCDS DB by GeneID:7625See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42982.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400451.7 ENSP00000383301.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000400451.7Link to Ensembl Protein Viewer:ENSP00000383301.2Re-query CCDS DB by Nucleotide ID:ENST00000400451Re-query CCDS DB by Protein ID:ENSP00000383301
Original member Current member EBI ENST00000611540.4 ENSP00000483077.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611540.4Link to Ensembl Protein Viewer:ENSP00000483077.1Re-query CCDS DB by Nucleotide ID:ENST00000611540Re-query CCDS DB by Protein ID:ENSP00000483077
Original member Current member NCBI NM_001256524.2 NP_001243453.1 Accepted alive Link to Nucleotide Sequence:NM_001256524.2Link to Protein Sequence:NP_001243453.1Re-query CCDS DB by Nucleotide ID:NM_001256524Re-query CCDS DB by Protein ID:NP_001243453Link to BLAST:NP_001243453.1
Original member Current member NCBI NM_003426.4 NP_003417.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003426.4Link to Protein Sequence:NP_003417.2Re-query CCDS DB by Nucleotide ID:NM_003426Re-query CCDS DB by Protein ID:NP_003417Link to BLAST:NP_003417.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243453.1 644 Q16587-1 644 100% 0 0
NP_003417.2 644 Q16587-1 644 100% 0 0

Chromosomal Locations for CCDS 42982.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 20394629 20394662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20395333 20395418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20400632 20400758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20401277 20401372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20405377 20406968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1935 nt):
ATGGAGATCCCTGCCCCGGAGCCCGAGAAGACAGCTCTTTCCTCTCAGGATCCTGCTCTTTCCCTGAAAG
AGAATCTCGAGGATATATCGGGTTGGGGTCTTCCCGAAGCCAGGTCCAAGGAATCGGTGAGTTTCAAGGA
TGTGGCTGTGGACTTCACCCAGGAGGAGTGGGGTCAACTAGACTCCCCTCAGAGGGCCTTGTACCGGGAT
GTGATGTTGGAGAACTACCAGAACCTTCTTGCCCTAGGACCTCCACTGCACAAGCCAGATGTGATCTCTC
ATCTGGAACGAGGCGAGGAGCCATGGAGCATGCAGAGGGAAGTCCCCAGAGGGCCCTGTCCAGAATGGGA
GCTGAAGGCGGTGCCCTCTCAACAGCAGGGCATTTGCAAAGAAGAACCGGCCCAGGAGCCCATCATGGAG
CGGCCCCTCGGCGGGGCGCAGGCGTGGGGGCGCCAGGCAGGTGCTCTGCAGAGGAGTCAGGCTGCGCCCT
GGGCGCCCGCACCTGCCATGGTCTGGGACGTCCCTGTAGAGGAATTCCCCCTCAGGTGTCCCCTCTTCGC
CCAGCAACGCGTTCCCGAGGGGGGACCCTTGCTGGACACACGCAAGAACGTCCAGGCCACTGAGGGCAGA
ACCAAGGCCCCCGCGAGACTGTGTGCAGGGGAAAACGCCTCCACGCCAAGTGAGCCAGAAAAGTTCCCCC
AGGTGCGCCGGCAGCGCGGGGCGGGCGCCGGGGAGGGCGAGTTCGTGTGCGGCGAGTGCGGGAAGGCGTT
CCGCCAGAGCTCCTCCCTCACGCTGCACCGGCGCTGGCACAGCCGGGAGAAGGCTTACAAGTGCGATGAA
TGCGGCAAGGCCTTCACCTGGAGCACCAACCTTCTGGAGCACCGGCGCATCCACACCGGCGAGAAGCCCT
TCTTCTGCGGCGAGTGCGGGAAGGCCTTCAGCTGCCACTCGTCCCTCAACGTGCACCAGCGCATCCACAC
GGGCGAGCGGCCCTACAAGTGCAGCGCCTGCGAGAAGGCCTTCAGCTGCAGCTCGCTGCTCAGCATGCAC
CTGCGGGTGCACACCGGCGAGAAGCCCTACCGGTGCGGCGAGTGCGGCAAGGCCTTCAACCAGCGTACAC
ACCTCACACGCCACCACCGCATCCACACGGGCGAGAAGCCCTACCAGTGCGGCTCCTGCGGCAAGGCCTT
CACCTGCCACTCATCCCTCACCGTGCATGAGAAGATCCACAGCGGGGACAAGCCGTTCAAGTGCAGCGAC
TGCGAGAAGGCCTTCAACAGCCGCTCGCGCCTCACCCTCCACCAGAGGACGCACACGGGCGAGAAGCCCT
TCAAGTGCGCCGACTGCGGGAAGGGCTTCAGCTGCCACGCGTACCTGCTCGTGCACCGGCGCATCCACAG
CGGCGAGAAGCCCTTCAAGTGCAACGAGTGCGGCAAAGCCTTCAGCTCCCACGCCTACCTCATCGTGCAC
CGGCGCATCCACACAGGCGAGAAGCCCTTCGACTGCAGCCAGTGTTGGAAGGCCTTCAGCTGCCACTCGT
CCCTCATCGTGCACCAGCGCATCCACACCGGTGAGAAGCCCTACAAGTGCAGCGAGTGCGGCAGAGCCTT
CAGCCAGAACCACTGTCTCATTAAACATCAGAAAATCCACTCCGGGGAGAAGTCGTTTAAGTGTGAGAAA
TGTGGGGAGATGTTCAACTGGAGCTCGCACCTCACTGAGCACCAGAGGCTGCACAGCGAGGGGAAGCCCT
TGGCCATCCAGTTCAACAAACACCTGCTCAGCACATACTACGTGCCTGGCAGCCTGCTGGGTGCAGGGGA
TGCTGGACTGAGGGACGTGGATCCCATCGACGCGCTGGATGTGGCAAAGCTCTTGTGCGTGGTTCCCCCC
AGAGCTGGCAGGAATTTCTCCCTGGGGAGCAAACCTCGAAACTAA

Translation (644 aa):
MEIPAPEPEKTALSSQDPALSLKENLEDISGWGLPEARSKESVSFKDVAVDFTQEEWGQLDSPQRALYRD
VMLENYQNLLALGPPLHKPDVISHLERGEEPWSMQREVPRGPCPEWELKAVPSQQQGICKEEPAQEPIME
RPLGGAQAWGRQAGALQRSQAAPWAPAPAMVWDVPVEEFPLRCPLFAQQRVPEGGPLLDTRKNVQATEGR
TKAPARLCAGENASTPSEPEKFPQVRRQRGAGAGEGEFVCGECGKAFRQSSSLTLHRRWHSREKAYKCDE
CGKAFTWSTNLLEHRRIHTGEKPFFCGECGKAFSCHSSLNVHQRIHTGERPYKCSACEKAFSCSSLLSMH
LRVHTGEKPYRCGECGKAFNQRTHLTRHHRIHTGEKPYQCGSCGKAFTCHSSLTVHEKIHSGDKPFKCSD
CEKAFNSRSRLTLHQRTHTGEKPFKCADCGKGFSCHAYLLVHRRIHSGEKPFKCNECGKAFSSHAYLIVH
RRIHTGEKPFDCSQCWKAFSCHSSLIVHQRIHTGEKPYKCSECGRAFSQNHCLIKHQKIHSGEKSFKCEK
CGEMFNWSSHLTEHQRLHSEGKPLAIQFNKHLLSTYYVPGSLLGAGDAGLRDVDPIDALDVAKLLCVVPP
RAGRNFSLGSKPRN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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