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Report for CCDS42375.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42375.1 Public Homo sapiens 17 C17orf58 22 109 92 CCDS HistoryNCBI Gene:284018Re-query CCDS DB by CCDS ID:42375.1Re-query CCDS DB by GeneID:284018See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42375.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI,WTSI ENST00000334461.7 ENSP00000334741.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000334461.7Link to Ensembl Protein Viewer:ENSP00000334741.7Re-query CCDS DB by Nucleotide ID:ENST00000334461Re-query CCDS DB by Protein ID:ENSP00000334741
Original member Current member NCBI NM_181656.4 NP_858042.2 Accepted alive Link to Nucleotide Sequence:NM_181656.4Link to Protein Sequence:NP_858042.2Re-query CCDS DB by Nucleotide ID:NM_181656Re-query CCDS DB by Protein ID:NP_858042Link to BLAST:NP_858042.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_858042.2 75 Q2M2W7-2 75 100% 0 0

Chromosomal Locations for CCDS 42375.1

Assembly GRCh38.p12 (GCF_000001405.38)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 67992919 67993146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (228 nt):
ATGAACCGCCTGTACCTCACCCCCGACGGCTTCTTCTTCCGAGTCCACATGTTAGCCCTGGACTCCTCCA
GC
TGCAATAAGCCGTGTCCAGAGTTTAAACCTGGTATTGAAACTGACCTGAATGACGCTGCATATGTACT
T
TATACCACCGTTTGTAACGTGGGTGCCACAGCCCGGGCTGTAGGTCGCCCAGCCTTTTTTTGGGAGCGA
TGG
GAAACAATGACATGA


Translation (75 aa):
MNRLYLTPDGFFFRVHMLALDSSSCNKPCPEFKPGIETDLNDAAYVLYTTVCNVGATARAVGRPAFFWER
W
ETMT




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser