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Report for CCDS42223.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42223.1 Public Homo sapiens 16 DBNDD1 24 110 108 CCDS HistoryNCBI Gene:79007Re-query CCDS DB by CCDS ID:42223.1Re-query CCDS DB by GeneID:79007See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42223.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000002501.11 ENSP00000002501.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000002501.11Link to Ensembl Protein Viewer:ENSP00000002501.6Re-query CCDS DB by Nucleotide ID:ENST00000002501Re-query CCDS DB by Protein ID:ENSP00000002501
Original member Current member NCBI NM_001042610.3 NP_001036075.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001042610.3Link to Protein Sequence:NP_001036075.1Re-query CCDS DB by Nucleotide ID:NM_001042610Re-query CCDS DB by Protein ID:NP_001036075Link to BLAST:NP_001036075.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001036075.1 158 Q9H9R9-1 158 100% 0 0

Chromosomal Locations for CCDS 42223.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 90006335 90006492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90008784 90008924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90009284 90009430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 90019311 90019341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (477 nt):
ATGGAGCCCCCGGAGGGCGCCGGCACCGGAGAGATCGTTAAGGAGGCTGAGGTGCCGCAGGCTGCGCTGG
GCGTCCCAGCCCAGGGGACAGGGGACAATGGCCACACGCCTGTGGAGGAGGAGGTCGGGGGCATCCCAGT
ACCAGCACCGGGGCTCCTGCAGGTCACGGAGAGGAGGCAGCCTCTGAGCAGCGTCTCCTCTCTGGAGGTC
CACTTCGACCTCCTGGACCTCACTGAGCTCACCGACATGTCGGACCAGGAGCTGGCCGAGGTCTTTGCTG
ACTCGGACGACGAGAACCTCAACACCGAGTCCCCAGCAGGTCTGCACCCGCTGCCCCGGGCCGGCTACCT
GCGCTCCCCTTCCTGGACGAGGACAAGGGCTGAGCAGAGCCACGAGAAGCAGCCCCTAGGCGACCCCGAG
CGGCAGGCCACAGTCCTGGACACGTTTCTCACTGTGGAGAGGCCCCAGGAGGACTAG

Translation (158 aa):
MEPPEGAGTGEIVKEAEVPQAALGVPAQGTGDNGHTPVEEEVGGIPVPAPGLLQVTERRQPLSSVSSLEV
HFDLLDLTELTDMSDQELAEVFADSDDENLNTESPAGLHPLPRAGYLRSPSWTRTRAEQSHEKQPLGDPE
RQATVLDTFLTVERPQED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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