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Report for CCDS4102.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4102.2 Public Homo sapiens 5 WDR36 24 110 108 CCDS HistoryNCBI Gene:134430Re-query CCDS DB by CCDS ID:4102.2Re-query CCDS DB by GeneID:134430See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 4102.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000513710.4 ENSP00000424628.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000513710.4Link to Ensembl Protein Viewer:ENSP00000424628.3Re-query CCDS DB by Nucleotide ID:ENST00000513710Re-query CCDS DB by Protein ID:ENSP00000424628
Original member Current member NCBI NM_139281.3 NP_644810.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_139281.3Link to Protein Sequence:NP_644810.2Re-query CCDS DB by Nucleotide ID:NM_139281Re-query CCDS DB by Protein ID:NP_644810Link to BLAST:NP_644810.2

Chromosomal Locations for CCDS 4102.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 111092457 111092618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111094920 111094947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111097079 111097179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111098722 111098839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111100589 111100721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111102345 111102399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111103786 111103918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111104177 111104352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111104697 111104817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111105295 111105360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111106057 111106143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111107294 111107439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111110189 111110303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111110788 111110953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111111170 111111278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111113074 111113153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111119013 111119120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111120496 111120593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111120996 111121141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111123805 111123924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111124108 111124189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111125608 111125795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 111126734 111126883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2688 nt):
ATGGAACGGGCCTCAGAAAGGCGCACGGCCAGCGCGCTTTTTGCGGGGTTCCGGGCCTTGGGACTTTTCA
GCAACGACATTCCACACGTGGTGCGGTTCAGCGCGCTCAAGCGCCGGTTCTATGTAACAACCTGCGTGGG
CAAGAGTTTCCACACCTATGACGTTCAGAAACTTAGTCTGGTTGCAGTAAGTAATTCTGTTCCACAGGAT
ATCTGCTGTATGGCAGCTGATGGCAGATTAGTCTTTGCTGCTTATGGAAATGTTTTCTCTGCATTTGCCC
GTAATAAAGAGATAGTACATACCTTTAAGGGTCATAAGGCAGAAATCCATTTCTTGCAACCCTTTGGAGA
CCACATTATCTCTGTTGATACTGATGGCATTCTTATTATTTGGCACATATATTCAGAAGAAGAATACCTG
CAGTTGACTTTTGATAAATCAGTATTTAAAATTTCTGCAATTTTGCATCCAAGTACCTACTTGAATAAAA
TACTTCTGGGCAGTGAACAAGGAAGCCTGCAGTTGTGGAATGTAAAATCCAATAAACTTCTATATACATT
TCCAGGATGGAAAGTTGGAGTGACAGCTCTTCAGCAGGCACCAGCCGTGGATGTTGTTGCTATTGGTCTT
ATGTCAGGTCAAGTTATCATTCACAACATTAAATTTAATGAAACATTAATGAAGTTTCGTCAAGACTGGG
GACCCATTACTTCAATTTCATTTCGCACAGATGGTCATCCAGTAATGGCAGCTGGAAGCCCATGTGGCCA
TATTGGACTCTGGGATCTAGAAGACAAAAAATTAATCAACCAAATGAGAAATGCACACTCTACAGCAATT
GCCGGACTGACATTTCTCCATAGAGAGCCACTTCTTGTCACAAATGGCGCTGACAATGCTCTTAGGATAT
GGATATTTGATGGTCCTACAGGTGAAGGCCGACTTTTGAGATTCAGAATGGGTCATAGTGCTCCTCTTAC
CAATATCAGATATTATGGACAGAATGGACAGCAGATTCTAAGTGCAAGTCAAGATGGAACTCTTCAGTCA
TTTTCCACGGTACATGAAAAATTCAATAAGAGCTTGGGACATGGATTAATAAATAAAAAGAGAGTTAAAC
GTAAAGGACTTCAGAATACCATGTCAGTGAGACTTCCACCCATCACAAAGTTTGCAGCAGAGGAAGCTCG
TGAAAGTGACTGGGATGGTATCATTGCTTGCCATCAAGGTAAGCTATCTTGCTCAACCTGGAATTATCAG
AAATCTACAATAGGCGCTTACTTTCTCAAGCCAAAAGAGTTGAAGAAAGATGACATAACTGCAACAGCAG
TGGATATAACTTCTTGTGGAAACTTTGCTGTAATTGGCCTCTCATCAGGAACTGTAGATGTATATAACAT
GCAGTCTGGCATACATCGAGGAAGTTTTGGCAAGGATCAAGCTCACAAGGGATCTGTTAGAGGTGTCGCA
GTGGATGGATTAAACCAGTTGACAGTTACAACTGGTAGTGAAGGATTACTCAAATTCTGGAACTTTAAAA
ACAAAATTTTAATCCATTCTGTGAGCCTCAGTTCATCTCCAAATATCATGTTGCTACATAGGGACAGTGG
CATTCTGGGACTCGCCTTGGATGACTTCTCCATTAGTGTTCTGGACATAGAAACTAGGAAGATTGTCAGA
GAGTTTTCTGGACACCAAGGCCAAATAAATGACATGGCTTTTAGTCCTGATGGTCGTTGGTTAATAAGTG
CTGCGATGGATTGCTCTATTAGGACTTGGGACCTTCCTTCTGGGTGCCTTATAGACTGCTTTTTGTTGGA
CTCGGCTCCTCTCAATGTTTCTATGTCTCCTACTGGAGACTTTCTGGCAACTTCCCATGTGGACCACCTT
GGAATTTATCTATGGTCCAATATTTCCCTGTATTCAGTTGTTTCATTACGGCCACTTCCTGCAGATTATG
TCCCTTCAATAGTCATGCTTCCTGGTACTTGTCAAACCCAAGATGTAGAAGTATCAGAAGAAACAGTAGA
ACCAAGTGATGAATTGATAGAATATGATTCGCCAGAACAGTTGAATGAGCAATTGGTGACTCTTTCACTT
CTTCCTGAATCACGATGGAAAAACCTTCTTAACCTTGATGTTATTAAGAAAAAGAATAAACCAAAGGAAC
CACCCAAAGTACCCAAATCAGCACCATTTTTCATTCCAACAATTCCTGGCCTTGTACCCAGATATGCTGC
ACCTGAACAAAATAATGATCCCCAGCAGTCTAAAGTGGTAAATCTTGGAGTTTTGGCTCAAAAATCAGAT
TTCTGCTTGAAACTTGAAGAAGGACTGGTAAATAATAAGTATGACACTGCTCTCAACCTTCTGAAAGAAT
CAGGCCCATCAGGAATTGAAACAGAGCTGCGAAGCTTGTCTCCTGATTGTGGTGGGTCCATAGAAGTTAT
GCAGAGCTTCTTGAAAATGATTGGGATGATGCTGGACAGAAAGCGTGATTTTGAGTTAGCCCAGGCATAC
CTTGCATTGTTTCTAAAGTTACACCTTAAAATGCTTCCTTCAGAGCCAGTACTCCTAGAAGAAATAACAA
ATTTGTCATCCCAGGTGGAAGAAAACTGGACCCATTTGCAATCACTCTTCAATCAAAGCATGTGTATTTT
AAATTATCTCAAAAGTGCTTTGTTGTAA

Translation (895 aa):
MERASERRTASALFAGFRALGLFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSVPQD
ICCMAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHFLQPFGDHIISVDTDGILIIWHIYSEEEYL
QLTFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKSNKLLYTFPGWKVGVTALQQAPAVDVVAIGL
MSGQVIIHNIKFNETLMKFRQDWGPITSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAI
AGLTFLHREPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTNIRYYGQNGQQILSASQDGTLQS
FSTVHEKFNKSLGHGLINKKRVKRKGLQNTMSVRLPPITKFAAEEARESDWDGIIACHQGKLSCSTWNYQ
KSTIGAYFLKPKELKKDDITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHRGSFGKDQAHKGSVRGVA
VDGLNQLTVTTGSEGLLKFWNFKNKILIHSVSLSSSPNIMLLHRDSGILGLALDDFSISVLDIETRKIVR
EFSGHQGQINDMAFSPDGRWLISAAMDCSIRTWDLPSGCLIDCFLLDSAPLNVSMSPTGDFLATSHVDHL
GIYLWSNISLYSVVSLRPLPADYVPSIVMLPGTCQTQDVEVSEETVEPSDELIEYDSPEQLNEQLVTLSL
LPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNNDPQQSKVVNLGVLAQKSD
FCLKLEEGLVNNKYDTALNLLKESGPSGIETELRSLSPDCGGSIEVMQSFLKMIGMMLDRKRDFELAQAY
LALFLKLHLKMLPSEPVLLEEITNLSSQVEENWTHLQSLFNQSMCILNYLKSALL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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