CCDS
Home
FTP
Process
Releases & Statistics
Collaborators
EBI
HGNC
MGI
NCBI
Contact Us
email CCDS
Genome Displays Related Resources
Gene
HomoloGene
MANE
RefSeq
|
 |
Report for CCDS4099.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
4099.1 |
Public |
Homo sapiens |
5 |
PJA2 |
24 |
110 |
108 |
          |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 4099.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
 |
 |
EBI |
ENST00000361189.7 |
ENSP00000354775.2 |
MANE Select |
Accepted |
alive |
      |
 |
 |
EBI |
ENST00000361557.4 |
ENSP00000355284.3 |
|
Accepted |
alive |
      |
 |
 |
NCBI |
NM_014819.5 |
NP_055634.3 |
MANE Select |
Accepted |
alive |
        |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_055634.3 |
708 |
O43164-1 |
708 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 4099.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2127 nt): ATGTCACAGTACACTGAAAAGGAGCCAGCAGCAATGGACCAAGAATCTGGTAAGGCTGTCTGGCCCAAAC CAGCAGGAGGGTATCAGACAATTACAGGCAGGAGATATGGAAGAAGACATGCTTATGTCAGTTTTAAACC ATGTATGACCAGACATGAAAGAAGCTTAGGTCGGGCTGGTGATGACTATGAAGTGTTGGAACTAGATGAT GTTCCAAAGGAAAATTCCTCAGGTTCCAGTCCTTTGGATCAAGTTGATTCTTCTTTACCCAGTGAACCTA TATTTGAAAAAAGTGAAACAGAAATTCCCACTTGTGGTTCAGCATTGAATCAAACCACTGAGAGCAGTCA ATCCTTTGTTGCAGTACATCACAGTGAGGAAGGCAGGGATACCTTAGGAAGCAGTACAAATCTTCATAAT CACTCTGAGGGAGAGTATATTCCAGGAGCTTGTAGTGCTTCAAGTGTCCAAAATGGAATTGCATTGGTTC ATACAGACTCTTATGATCCAGATGGCAAACATGGAGAAGATAATGACCATCTTCAACTTTCTGCAGAAGT CGTGGAAGGTAGTAGATACCAGGAATCATTAGGCAATACAGTATTTGAGTTGGAAAACAGAGAGGCAGAG GCATACACTGGTCTTTCACCACCAGTTCCCTCATTTAACTGTGAAGTAAGAGATGAGTTTGAAGAGTTAG ATTCTGTACCATTAGTGAAAAGTTCTGCTGGTGATACTGAGTTTGTCCATCAGAATAGCCAGGAAATTCA GAGGTCTTCTCAAGATGAAATGGTTAGTACGAAACAACAAAATAATACTAGCCAGGAAAGACAGACAGAA CATTCACCTGAAGATGCAGCCTGTGGTCCAGGGCATATTTGTAGTGAACAAAATACCAATGATAGGGAAA AGAACCATGGAAGTTCTCCTGAACAGGTAGTGAGGCCAAAAGTTAGAAAACTGATAAGTTCAAGCCAGGT GGACCAAGAAACAGGTTTTAATAGGCATGAGGCGAAACAAAGAAGTGTTCAAAGATGGAGAGAGGCTTTG GAAGTTGAGGAAAGTGGCTCAGATGACCTCTTAATAAAATGTGAAGAATATGATGGAGAGCATGACTGTA TGTTCTTGGATCCACCATACTCAAGAGTTATTACACAAAGGGAAACAGAAAATAACCAAATGACATCAGA AAGTGGAGCCACAGCAGGAAGGCAAGAGGTGGATAACACCTTTTGGAATGGCTGTGGAGATTATTACCAA CTCTATGACAAAGATGAAGATAGTTCTGAATGCAGTGATGGGGAATGGTCTGCTTCTTTGCCTCATCGAT TTTCTGGTACAGAAAAAGATCAATCCTCAAGTGATGAAAGCTGGGAGACTCTGCCAGGAAAAGATGAGAA TGAACCTGAGCTACAAAGTGATAGCAGTGGCCCTGAAGAAGAAAACCAAGAATTATCTCTTCAGGAAGGG GAACAGACATCCTTGGAAGAGGGAGAAATTCCTTGGTTACAGTACAATGAAGTCAATGAAAGCAGCAGTG ATGAGGGAAATGAACCTGCCAATGAATTTGCACAGCCAGCTTTCATGTTGGATGGTAACAATAACCTGGA GGATGACTCCAGTGTGAGTGAAGACTTAGATGTGGATTGGAGCCTATTTGATGGCTTTGCAGATGGACTA GGAGTTGCTGAAGCTATTTCATATGTGGATCCTCAGTTCCTTACCTACATGGCACTAGAAGAACGCTTAG CCCAGGCTATGGAGACTGCTCTGGCCCATTTAGAGTCTCTTGCAGTGGATGTTGAGGTGGCCAATCCACC AGCTAGTAAGGAAAGCATTGATGGTCTTCCAGAGACCCTTGTTCTTGAAGATCACACTGCTATTGGTCAG GAACAATGCTGTCCAATCTGTTGCAGTGAGTATATTAAGGATGATATAGCAACAGAGTTGCCCTGTCACC ATTTCTTTCACAAACCTTGTGTCTCAATTTGGCTACAAAAGTCGGGAACATGCCCTGTGTGCCGCCGTCA TTTCCCACCTGCGGTTATTGAAGCATCTGCAGCTCCTTCCTCTGAGCCTGATCCTGATGCCCCACCTTCA AATGACAGTATTGCAGAAGCACCCTAA
Translation (708 aa): MSQYTEKEPAAMDQESGKAVWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAGDDYEVLELDD VPKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQSFVAVHHSEEGRDTLGSSTNLHN HSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDHLQLSAEVVEGSRYQESLGNTVFELENREAE AYTGLSPPVPSFNCEVRDEFEELDSVPLVKSSAGDTEFVHQNSQEIQRSSQDEMVSTKQQNNTSQERQTE HSPEDAACGPGHICSEQNTNDREKNHGSSPEQVVRPKVRKLISSSQVDQETGFNRHEAKQRSVQRWREAL EVEESGSDDLLIKCEEYDGEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCGDYYQ LYDKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEEENQELSLQEG EQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPAFMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGL GVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQ EQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIEASAAPSSEPDPDAPPS NDSIAEAP
|