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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS40686.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40686.1 |
Public |
Mus musculus |
9 |
Rfx7 |
23 |
108 |
98 |
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Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 40686.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000163401.8 |
ENSMUSP00000127192.1 |
Accepted |
alive |
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NCBI |
NM_001033536.1 |
NP_001028708.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001028708.1 |
1459 |
F8VPJ6 |
1459 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 40686.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (4380 nt): ATGGCAGAGGAACAACAACAGCCGCCACCACAGCAGCTCGATGCCCCTCAGCAGCTTCCCCTCAGCGCCC CCAACCCCGGGGTGGCTCTGCCAGCCCTTGTGCCCGGGCTGCCAGGGACAGAGGCCAACGCTCTGCAACA CAAGATCAAGAACTCCATCTGCAAAACTGTACAATCTAAAGTGGACTGCATTTTGCAAGAAGTTGAGAAG TTTACAGACCTAGAGAAACTCTACCTCTACCTTCAACTGCCTTCTGGTCTTAGCAGTGCAGAGAAAAGTG ATCAGAATGCCATGTCATCTAGTCGGGCACAGCAAATGCATGCCTTTTCCTGGATTCGAAATACCTTAGA GGAGCATCCTGAGACGTCACTCCCCAAACAGGAAGTCTATGATGAATACAAGAGCTACTGCGACAATCTT GGCTACCATCCATTAAGTGCTGCTGACTTTGGAAAAATCATGAAAAACGTCTTTCCAAACATGAAGGCAC GCCGTTTAGGCACTAGAGGCAAATCTAAATATTGCTACAGTGGACTAAGGAAAAAAGCTTTTGTTCATAT GCCAACACTGCCCAACCTTGACTTTCATAAAACTGGAGATGGGTTGGAAGGAGTTGAACCATCTGGGCAG CTTCAAAATATTGATGAGGAAGTTATCTCTTCTGCTTGCCGTCTTGTGTGTGAGTGGGCCCAGAAAGTGT TAAGCCAGCCATTTGACACAGTCTTGGAATTAGCCCACTTCCTTGTAAAGAGTCACTATATAGGCACCAA GTCAATGGCAGCTCTGACTGTGATGGCGGCAGCACCGGCAGGACTTAAAGGAATTCCCCAGCCTTCTGCT TTTATACCTACAGCTGAAAGTAATTCCTTTCAACCTCAAGTAAAGACTTTGCCATCTCCAATTGATGCTA AGCAGCAGTTGCAACGGAAAATTCAAAAAAAGCAGCAAGAACAGAAACTACAATCTCCATTGCCAGGAGA ATCCTCAGCAAAAAAGCCAGAAGGCACTACAGCCAACGGAGTGGCTAATCTACCCAATGGGAACCCTGCG ATCCTTTCTCCCCAGCCCATTGGGATCGTGGTGGCAGCTGTCCCTAGCCCCATTCCGGTCCAGCGGACAA GGCAGTTAGTAACTTCACCAAGTCCAATGAATTCTCCTGATGGCAAAGTTCTTCCCCTCAATGTGCAAGT GGTCACTCAGCACATGCAGTCTGTGAAACAGACACCAAAGACTCCTCAGAACGTTCCAGCCAGTCCTGGT GGGGACCGTTCTGCCAGACACCGCTACCCTCAGATCTTACCCAAGCCAGCAAACACCAGTGCGCTCACCA TCCGCTCTCCTACAACTGTGCTCTTTACTAGCAGTCCCATCAAAACTGCTGTGGTACCTGCATCACACAT GAGTTCTCTAAATGTGGTGAAAATGACAACAATATCCCTCACACCCAGTAACAGTAATGCGCCTCTTAAA CATTCTGCCTCAGTCAGCAGTGCTACTGGAACAACAGAGGAATCAAGGATTGTTCCTCAGATCAAGAATG GTTCTGTCGTTTCTCTTCAGTCTCCTGGGTCCAGGGCTAGCAGCACTGGGGGAACTTCGGCTGTGGAAGT CAAAATGGAACCAGAAGGTTCATCAGATGAGCATCCTCTCCAGTGCCAAGAGAACTCTGAGGAGACAAAA GCTCCCCTGACAACATCTAGTGCCCTTTGGGGCCAGAAAAGTAATACAGATGGAACAGTACCAAAACCTT CTAATGAAGGTGTCACTGAAGTGAAAACAACTAAGGTCTGTGACCAGAGGACCAAATGTAAAAATCGATG TAATGAAATTCTGTCAGGCATCTCAGCAGGCAATAATCAAAGCACTGTTACTCTCTCGGTTGCTACTCAG AACTTACCTTTCACCAGCACCAGCTCACCATCTAATGGTGACTCAGTAAATAAAGACCCTAAAATATGCA CTAAAAGTCCAAGGAAACGACTGTCTGCTACATTGCAAGAGTCTCAGGTGCCTCCTGTAAAGAAACCAAT TGTGGAACAGCTTTCTGCAGTTACTATAGAAGGTCAGAAACCAGGCACTGTTAAAAAGGACCAAAAGGTT CCACATTCAGGGAAAACAGAAAGTTCAACAGCAGGTGCTCAGATTCCTAACAAGGTGTCAATCAGTGTCA GTTCACAGATAATAGAGGATCAGCCCGTGAACCCTGCTCTTGTCACCAGTGAACCAGTTCTGGAGCAGCA GACAACGCCATCATCGTCTCCGGATGTAAAAGTCAAACTTGAAGGGAGTGTCTTTCTCTTGGACCGTGAG TCAAAATCAGATGGCAGCTTTAATCGTAACGAATGGCAACAAGTTACTAAGGATTCTGACTTCATAGCTG CCAGCTGTGAGCATCAGCAAGACATTAGTGTTATGACGATTGCTGAGCATCCTGACATCCATGATTTAGA GAAATCTGTTTGGGAATTAGAAGGGATGCCACAGGACACATACAGCCAGCAGCTACATAGCCAGATACCA GAATCTTCTCTGAATGAAATACAAGCACAGTCTTCAGATCAGTTGCCATTGCAATCGGAACTGAAAGAGT TTGAGTCTTCTGTTTCCCAGACAAATGAAAGCTACTTTCCTTTTGACGATGAACTTACACAAGATAGCAT TGTGGAAGAGCTGGTACTTATGGAGCAGCAGATGTCAATGAATAATTCACATTCTTATGGTAACTGCTTG GGAATGAGCCTTCAGAATCAGTCAGTAACTCCAGGAGCTCCAATGTCATCTCATGCTTCCAGCACTCACT TCTATCATCCAATTCATAGCAATGGCACTCCAATTCACACACCTACACCCACACCCACTCCTACACCAAC TCCAACCCCAACTCCAACCCCAACGTCTGAAATGATTGCTGGGTCTCAGAGTCTGTCACGGGAGAGCCCT TGTTCCAGGCTTGCCCAGACAACACCTGTGGATAGTGCTTTAGGAAGTAGCCGACACACACCCATTGGTA CTCCTCATTCTAATTGCAGCAGTAGCGTCCCTCCAAGCCCTGTTGAATGCAGGAATCCATTTGCATTCAC TCCAATAAGCTCCAGTATGGCATATCACGATGCCAGCATTGTCTCAAGCAGTCCTGTGAAACCAATGCAA AGACCCATGGCCACTCACCCTGATAAAACCAAGCTTGAATGGATGAATAATGGGTATGGTGGGGTTGGTA ATTCATCGGTTTCTGGTCATGGCATTCTCCCAAGCTATCAGGAACTAGTAGAAGATCGTTTCAGGAAACC TCATGCTTTTGCTGTACCTGGACAGTCATATCAGTCTCAGTCCAGACACCATGACACTCATTTTGGTCGT TTGACTCCCGTCTCTCCTGTGCAGCATCAAGGTGCCACTGTAAACACCAACAAGCAAGAAGGGTTTGCAG TCCCAGCTCCTCTTGATAATAAGGGAACTAATTCATCTGCCGGCAGCAACTTCAGGTGCCGGAGTGTGAG CCCTGCTGTCCATCGCCAACGGAATCTTAGTGGAAGCACCCTCTATCCTGTGTCTAATATCCCACGGTCT AATGTAACCCCCTTTGGAAGTCCAGTGACCCCAGAAGTTCATGTTTTCACAAATGTTCACACAGATGCAT GTGCCAACAACATAGCTCAAAGAAGTCAGTCAGTTCCATTGACAGTCATGATGCAAACAGCCTTCCCAAA CGCTCTGCAGAAGCAAACAAACAGTAAAAAAATCACTAATGTTTTGTTGAGTAAACTCGATTCTGACAAT GATGATTCAGTGAGAGGTTTGGGAATTAACAACGTACCCTCCAATTACACAGCCCGGATGAATCTCACCC AGATTTTGGAAACTTCCCCTGTTTTTCCTAGTGCCAACTCACAAAATATGATCGATTCCAGCACTTCTGT TTATGAATTCCAAACACCATCTTACCTCACCAAAAGTAATAGCACCGATCAGATCAGTTTTTCTCCTGGA GATAATCAAGCACAATCTGAAATTGGAGAACAGCAGTTAGATTTCAATAGCACTGTTAAAGACCTGTTGA GTGGAGACAACCTGCAAACCAGCCAGCAGCTGGTAGGTCAGGTGGCATCTGATCTCACCAACACTGCATC TGATTTCTCTAGCGACATCAGGTTGTCTTCTGACCTCTCAGGCAGCATCAATGATTTGAACACCTTAGAC CCAAATCTACTGTTTGATCCAGGTCGTCAGCAGGGACAGGATGATGAAGCCACACTGGAAGAATTAAAGA ATGACCCACTGTTTCAACAAATTTGCAGTGAGTCAATGAACTCTATGACTTCATCAGGTTTTGAATGGAT AGAAAGCAAGGACCATCCTACTGTTGAAATGTTGGGATAA
Translation (1459 aa): MAEEQQQPPPQQLDAPQQLPLSAPNPGVALPALVPGLPGTEANALQHKIKNSICKTVQSKVDCILQEVEK FTDLEKLYLYLQLPSGLSSAEKSDQNAMSSSRAQQMHAFSWIRNTLEEHPETSLPKQEVYDEYKSYCDNL GYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKKAFVHMPTLPNLDFHKTGDGLEGVEPSGQ LQNIDEEVISSACRLVCEWAQKVLSQPFDTVLELAHFLVKSHYIGTKSMAALTVMAAAPAGLKGIPQPSA FIPTAESNSFQPQVKTLPSPIDAKQQLQRKIQKKQQEQKLQSPLPGESSAKKPEGTTANGVANLPNGNPA ILSPQPIGIVVAAVPSPIPVQRTRQLVTSPSPMNSPDGKVLPLNVQVVTQHMQSVKQTPKTPQNVPASPG GDRSARHRYPQILPKPANTSALTIRSPTTVLFTSSPIKTAVVPASHMSSLNVVKMTTISLTPSNSNAPLK HSASVSSATGTTEESRIVPQIKNGSVVSLQSPGSRASSTGGTSAVEVKMEPEGSSDEHPLQCQENSEETK APLTTSSALWGQKSNTDGTVPKPSNEGVTEVKTTKVCDQRTKCKNRCNEILSGISAGNNQSTVTLSVATQ NLPFTSTSSPSNGDSVNKDPKICTKSPRKRLSATLQESQVPPVKKPIVEQLSAVTIEGQKPGTVKKDQKV PHSGKTESSTAGAQIPNKVSISVSSQIIEDQPVNPALVTSEPVLEQQTTPSSSPDVKVKLEGSVFLLDRE SKSDGSFNRNEWQQVTKDSDFIAASCEHQQDISVMTIAEHPDIHDLEKSVWELEGMPQDTYSQQLHSQIP ESSLNEIQAQSSDQLPLQSELKEFESSVSQTNESYFPFDDELTQDSIVEELVLMEQQMSMNNSHSYGNCL GMSLQNQSVTPGAPMSSHASSTHFYHPIHSNGTPIHTPTPTPTPTPTPTPTPTPTSEMIAGSQSLSRESP CSRLAQTTPVDSALGSSRHTPIGTPHSNCSSSVPPSPVECRNPFAFTPISSSMAYHDASIVSSSPVKPMQ RPMATHPDKTKLEWMNNGYGGVGNSSVSGHGILPSYQELVEDRFRKPHAFAVPGQSYQSQSRHHDTHFGR LTPVSPVQHQGATVNTNKQEGFAVPAPLDNKGTNSSAGSNFRCRSVSPAVHRQRNLSGSTLYPVSNIPRS NVTPFGSPVTPEVHVFTNVHTDACANNIAQRSQSVPLTVMMQTAFPNALQKQTNSKKITNVLLSKLDSDN DDSVRGLGINNVPSNYTARMNLTQILETSPVFPSANSQNMIDSSTSVYEFQTPSYLTKSNSTDQISFSPG DNQAQSEIGEQQLDFNSTVKDLLSGDNLQTSQQLVGQVASDLTNTASDFSSDIRLSSDLSGSINDLNTLD PNLLFDPGRQQGQDDEATLEELKNDPLFQQICSESMNSMTSSGFEWIESKDHPTVEMLG
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