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Report for CCDS4020.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4020.1 Public Homo sapiens 5 ANKRA2 24 110 108 CCDS HistoryNCBI Gene:57763Re-query CCDS DB by CCDS ID:4020.1Re-query CCDS DB by GeneID:57763See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4020.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296785.8 ENSP00000296785.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296785.8Link to Ensembl Protein Viewer:ENSP00000296785.3Re-query CCDS DB by Nucleotide ID:ENST00000296785Re-query CCDS DB by Protein ID:ENSP00000296785
Original member Current member NCBI NM_023039.5 NP_075526.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023039.5Link to Protein Sequence:NP_075526.1Re-query CCDS DB by Nucleotide ID:NM_023039Re-query CCDS DB by Protein ID:NP_075526Link to BLAST:NP_075526.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075526.1 313 Q9H9E1 313 100% 0 0

Chromosomal Locations for CCDS 4020.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 73552797 73552852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 73553406 73553486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 73554322 73554388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 73554861 73554986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 73555488 73555585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 73557575 73557640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 73561130 73561288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 73562593 73562881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGATACATCAACAAATCTGGATATTGGAGCCCAGCTTATCGTGGAAGAGTGTCCCAGCACTTATAGCC
TAACTGGCATGCCAGACATTAAAATAGAACATCCACTGGACCCAAATTCAGAAGAAGGGTCAGCTCAGGG
TGTTGCCATGGGAATGAAATTCATATTGCCTAACCGATTTGATATGAATGTGTGTTCTCGATTTGTGAAG
TCCTTAAATGAAGAAGATAGTAAAAATATTCAAGATCAGGTTAACTCTGACCTGGAGGTGGCATCTGTCC
TATTTAAAGCTGAATGCAATATCCATACATCTCCTTCTCCGGGAATTCAAGTAAGGCATGTCTACACCCC
CTCTACAACAAAGCATTTCTCACCCATAAAACAGTCAACCACTTTAACCAACAAACACAGAGGAAATGAG
GTCTCTACCACACCTCTGTTAGCAAATTCTTTGTCTGTTCACCAGTTGGCTGCTCAGGGAGAGATGCTCT
ATCTGGCTACTCGTATCGAACAAGAAAATGTTATCAATCACACGGATGAAGAAGGATTTACTCCTCTGAT
GTGGGCTGCAGCACACGGGCAAATAGCTGTGGTAGAGTTCCTACTTCAGAATGGTGCTGATCCCCAACTT
TTAGGAAAAGGTCGAGAAAGTGCACTGTCGTTGGCCTGTAGTAAAGGCTACACAGATATTGTCAAAATGC
TGCTTGATTGTGGAGTTGATGTAAATGAATATGATTGGAATGGAGGAACACCTCTGCTTTATGCTGTACA
TGGAAATCATGTGAAATGTGTAAAGATGCTCTTAGAAAGTGGGGCTGATCCAACAATTGAAACTGACTCT
GGATATAATTCTATGGATCTAGCTGTAGCCCTAGGCTATAGAAGTGTTCAACAGGTTATTGAGTCACATT
TGTTGAAGCTGCTTCAAAATATCAAGGAGTAG

Translation (313 aa):
MDTSTNLDIGAQLIVEECPSTYSLTGMPDIKIEHPLDPNSEEGSAQGVAMGMKFILPNRFDMNVCSRFVK
SLNEEDSKNIQDQVNSDLEVASVLFKAECNIHTSPSPGIQVRHVYTPSTTKHFSPIKQSTTLTNKHRGNE
VSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL
LGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDS
GYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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