CCDS Report for Consensus CDS

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Report for CCDS38558.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
38558.1	Public	Mus musculus	3	Ankrd35	23	108	98

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38558.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI,WTSI	ENSMUST00000048427.8	ENSMUSP00000047244.5	Accepted	alive
NCBI	NM_001081139.1	NP_001074608.1	Accepted	alive
NCBI	NM_001356538.1	NP_001343467.1	Accepted	alive

Chromosomal Locations for CCDS 38558.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)

Genome Browser links:

Chromosome	Start	Stop
3	96670411	96670449
3	96678133	96678263
3	96679180	96679268
3	96679630	96679694
3	96680471	96680528
3	96680627	96680697
3	96680962	96681068
3	96682027	96682211
3	96682994	96683031
3	96683183	96685174
3	96689146	96689235
3	96689445	96689510
3	96690192	96690251

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2991 nt):
ATGAAGCGCATCTTCTCCTGCTCCAGTTCACAAGTGGCGGTGGAGAAATGGAACCGACGTGATCAGAAGC TGCTGGAGGCGGTGCAGCGGGGGGACGTGGGACGCGTGGCTGCCTTGGCCTCTAGGAAGTCAGCCCGACC CACCAAACTAGACTCAAATGGCCAGTCCCCGTTCCATCTGGCAGCCTCCAAAGGCCTGACAGAGTGTCTG ACAATACTGCTTGCAAATGGGGCTGATATCAACAGCAAGAACGAGGACGGAAGCACTGCCCTTCATTTGG CCACCATCTCCTGTCAGCCACAGTGTGTGAAGGTCTTGCTTCAGCACGGTGCTAATGAAGATGCTGTGGA TGCAGAAAATCGCAGTCCATTACACTGGGCAGCCTCCTCTGGCTGCGCCTCAAGTGTCCTCCTGCTGTGT GACCACGAAGCCTTCCTGGACGTGCTGGATAATGATGGACGCACACCCCTGATGATTGCATCGCTGGGTG GTCATGCAGCTATCTGCTCACAGCTGTTGCAGAGAGGTGCCCGAGTTAATGTCACAGACAAGGATGACAA ATCAGCTTTGATCCTGGCCTGTGAGAAAGGCAGCGCTGAGGTGGCCGAGCTGCTCCTGAGCCATGGAGCG GACGCTGGAGCGGTGGACAGTTTGGGACACAACGCTCTTCATTATGCTTTGCGTACACAAGACAAGGAGC TGTGGAGGCTGTTACAGCAGGCCCTGAACCGGCGGCGGAGAGGCGGTCATGGACTGGTTCAACACCCAGA TCACCCATCTCAGGCCTCTTCATGTGAGCCTCGGGTGGGATCTCCTCCTAAGAACTCACGGAAAGTGGAG CCTGAGGAAGAGCAGGAGGAGGAGGGGGAGGAGCGGTGCTCAGAAGAGTGGAGGTGGAAGTTCGAGGAGG AGCAGAGGAAAGTTCATCAGCTGGAGCAGGAGCTCGTGCGAAAGACAGATGAGTGCAAGGCTCACGCTGC AGCCTTCTCAAGCCTAGAGGAGCAGATTCGAGAGCAAGCGCAAGAACTAGGCCATCTCCTAGTGCAAGAA CCGGGAGCTCCAGGAAATCAAGGCCCTGGTCTCCGGCCTGAGGGAGATGGTATGGAGGAGGGTTGTCCCC TGAACCTGCTGGCTGAGCGGATCCAAGAGCTGAAGAAGCAGCAGAAGGCACTGGCTACAATAAACCCAAC ATTAGTTCCCAAGAGAGCTGAAGAATTAGCCCCGGCTGAGATCCATCATGAAGTACACAGAAAGTCCCAA CCAGAGCAGGGGCTGCCCCAGGGCCCAAGTTCAGAAACCACCGGGAAAGCCACAGGACAGCAACCAAACA CCAATGGGGGGCAGAACCTTGGCCTCCAGAACACTGAGCAGGTGTGTGCTGGCCAGAAGGAGAGGACCCC AGCTCCAGGGACTGAAACAGCAGGCACAGTGGGAGAACCAGTGGGCATAGCCATGAATCAGCTCCTCCTA CAGCTAAGGGAAGAGCTGGCTGCAGTGTGGCGAGAAAAGGATGCTGCCAGAGGGGCTTTGTCAAGACCAG TTCTGGAGGGAGCCCTGGGGACTCCCAGAGCTGAGGCTGCAGCAGCTGCCTGGGAAAAGATGGAAGCCAG GCTTGAGAGGGTGCTGGTAAGGTTAGATGGAGCAAAGATGGGACTGCATGTGAAACCTGAGGTCCCTGTC CAGGGGTCCAGAGACGGAGCCCCGAAGGCAGTCCCGGGATGCTCTAAAGAGCAGGAAGAAAAGAAGGCTC TTGGAACCAGAGGAGAGCCCTTAGGGGCCCCTGGAAAAGAACAGGCCTTAGGAGGAGGCCTGGCAAAGGG ACAGCTGGAGAAAGAGGTGTCAGCTTTGAGACTGAGCAATAGCAACTTGCTGGAGGAATTGGGAGAGTTG GGGCGCGAGAGACAACGCTTGCAGGGAGAGCTGCAGTCCTTGACCCAGAGGCTACACCGGGAGTTTGTGC CCAAGCCCGAGGCACAGGTCCAGCTACAGCAGTTGCGGAGGAGCGTGGGGATGTTGACAGAGGAACTGGC CATGGAGAAGGAGGCCACAGATAAGCTGCGCAGGCTACTGGCCTCCCAGACTAGCGGCCTCCAAGGACTG TGGAAATGCCTACCCCCAGACCTCGTGGGCAAGGGGAATACACAGAGTACAGCTGCAGAACCCCTGGAGG AGCTGCAGGCCTGCATCAGCACCCTGGTGGATAGGCACCTTGAGGCTCAACGGGTGCTGGCTCGGTTGGA AGAGGAAAACCAGCAGCTGAGGGGATCCTTGGCTCCCTGTGGGGAACCAGAGGCCTCCCTCAAGGTTACA GCATCCCCGCAAGTGGCCGCCCTGGAGGAAGATCTGGGAATGCTAGAGGAAGAGCTACGGGCCGTGCAGG CCACGATGAGTGGGAAGAGCCAGGAGATTTGCAAGCTGAAACAACTGCTCTACCAAGCCACGGAAGAAGT GGCCGAGCTGAGAGCTCGGGAAGCAGCCAGCCTGCGCCAGCACGAGAAGACGCGAGGCTCGCTGGTGGCC CAGGCACAGGCTTGGGGCCAGGAGCTCAAAGTCGTGCTGGAGAAGTACAACACAGCCTGTCGGGAAATGA CTCGATTGCGGGACACTGTGGCGGAGGAACGTCGCCGCAGCGAGGACCTGGCGGCTAGGGCGGCGGAGCA GGAGCGCCAGGCTGGCGAGATGCGCGGGCGCTCGGAGCAGTTCGAGAAAACTGCTGAGCTCCTGAAAGAG AAGACAAACCACCTCATCGGGGCTTGCCGGGACAAGGAAGCCAAGATCAAGGAGTTGCTGAAGAAGCTCG AGCAGCTTTCGGAAGAAGTTCTAGAAGTCCGGGGCGAGAATGCCCACCTCGCCCTACAGCTGCAGGACTC CCAGAAGAACCACGAAGAGATCATCTCCACATACAGGAGTCATCTACTGAATGCTGCTCGGGGCTACATG GAACAAGACGTCTACAACATCCTACTTCGAATCCTCAGCATGCAGGAGTGA
Translation (996 aa):
MKRIFSCSSSQVAVEKWNRRDQKLLEAVQRGDVGRVAALASRKSARPTKLDSNGQSPFHLAASKGLTECL TILLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLC DHEAFLDVLDNDGRTPLMIASLGGHAAICSQLLQRGARVNVTDKDDKSALILACEKGSAEVAELLLSHGA DAGAVDSLGHNALHYALRTQDKELWRLLQQALNRRRRGGHGLVQHPDHPSQASSCEPRVGSPPKNSRKVE PEEEQEEEGEERCSEEWRWKFEEEQRKVHQLEQELVRKTDECKAHAAAFSSLEEQIREQAQELGHLLVQE PGAPGNQGPGLRPEGDGMEEGCPLNLLAERIQELKKQQKALATINPTLVPKRAEELAPAEIHHEVHRKSQ PEQGLPQGPSSETTGKATGQQPNTNGGQNLGLQNTEQVCAGQKERTPAPGTETAGTVGEPVGIAMNQLLL QLREELAAVWREKDAARGALSRPVLEGALGTPRAEAAAAAWEKMEARLERVLVRLDGAKMGLHVKPEVPV QGSRDGAPKAVPGCSKEQEEKKALGTRGEPLGAPGKEQALGGGLAKGQLEKEVSALRLSNSNLLEELGEL GRERQRLQGELQSLTQRLHREFVPKPEAQVQLQQLRRSVGMLTEELAMEKEATDKLRRLLASQTSGLQGL WKCLPPDLVGKGNTQSTAAEPLEELQACISTLVDRHLEAQRVLARLEEENQQLRGSLAPCGEPEASLKVT ASPQVAALEEDLGMLEEELRAVQATMSGKSQEICKLKQLLYQATEEVAELRAREAASLRQHEKTRGSLVA QAQAWGQELKVVLEKYNTACREMTRLRDTVAEERRRSEDLAARAAEQERQAGEMRGRSEQFEKTAELLKE KTNHLIGACRDKEAKIKELLKKLEQLSEEVLEVRGENAHLALQLQDSQKNHEEIISTYRSHLLNAARGYM EQDVYNILLRILSMQE

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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