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Report for CCDS38137.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38137.1 Public Mus musculus 2 Ppig 23 108 98 CCDS HistoryNCBI Gene:228005Re-query CCDS DB by CCDS ID:38137.1Re-query CCDS DB by GeneID:228005See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38137.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040915.14 ENSMUSP00000045945.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040915.14Link to Ensembl Protein Viewer:ENSMUSP00000045945.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000040915Re-query CCDS DB by Protein ID:ENSMUSP00000045945
Original member Current member EBI ENSMUST00000090858.9 ENSMUSP00000088370.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000090858.9Link to Ensembl Protein Viewer:ENSMUSP00000088370.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000090858Re-query CCDS DB by Protein ID:ENSMUSP00000088370
Original member NCBI NM_001081086.1 NP_001074555.1 Updated not alive Link to Nucleotide Sequence:NM_001081086.1Link to Protein Sequence:NP_001074555.1Re-query CCDS DB by Nucleotide ID:NM_001081086Re-query CCDS DB by Protein ID:NP_001074555
Current member NCBI NM_001081086.2 NP_001074555.1 Accepted alive Link to Nucleotide Sequence:NM_001081086.2Link to Protein Sequence:NP_001074555.1Re-query CCDS DB by Nucleotide ID:NM_001081086Re-query CCDS DB by Protein ID:NP_001074555Link to BLAST:NP_001074555.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074555.1 752 A2AR02 752 100% 0 0

Chromosomal Locations for CCDS 38137.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 69732214 69732274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69732380 69732454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69732818 69732925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69733189 69733233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69734291 69734378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69735868 69735897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69735989 69736128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69741486 69741693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69743613 69743780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69746028 69746115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69748961 69749097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 69749272 69750382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2259 nt):
ATGGGGATAAAGGTCCAGCGTCCTCGGTGTTTTTTTGACATTGCCATTAATAATCAACCTGCTGGAAGAG
TTGTCTTTGAATTATTTTCCGATGTATGTCCCAAAACGTGTGAGAACTTTCGCTGCCTTTGCACAGGTGA
AAAAGGGACAGGGAAATCAACTCAGAAGCCATTACATTATAAGAGCTGTCTCTTTCATAGAGTTGTCAAG
GATTTCATGGTTCAGGGTGGTGACTTCAGTGAAGGGAATGGAAGAGGAGGAGAATCTATTTATGGAGGAT
TCTTTGAAGATGAGAGTTTTGCTGTTAAACACAACAAAGAGTTTCTCTTATCAATGGCCAACAGAGGGAA
GGATACAAATGGCTCTCAGTTCTTTATAACAACAAAACCAACTCCTCATTTAGATGGGCATCATGTTGTT
TTTGGGCAAGTGATCTCTGGTCAGGAAGTTGTGAGAGAGATTGAAAACCAGAAAACAGATGCCGCTAGCA
AACCATTTGCTGAAGTTCGGATACTCAGTTGCGGAGAGCTGATTCCAAAGTCTAAGGTTAAGAAAGAAGA
AAAGAAAAGGCATAAGTCCTCGTCCTCCTCCTCCTCCAGTGACTCAGACAGCTCAAGCGATTCTCAGTCC
TCCTCTGAGTCTTCTGATTCTGAAAGCGCTTCCGAAGAAAAATCCAGAAAAAGGAAAAAGAAACATAGGA
AAAATTCCCGAAAGCATAAGAAGGAGAAGAAGAAGCGAAAGAAAAGCAAGAAAAGCCCATCTAGTGAAAG
TGAAGCAGAAAATGTTGATGCACAGCCCCAGTCTACTGTCCGTCCAGAAGAGATCCCTCCTATACCAGAA
AATAGATTTCTAATGAGAAAAAGTCCTCCTAAAGCCGATGACAAGGAGAGGAAAAACAGAGAGAGAGAAA
GAGAAAGAGAGTGTAATCCACCTAACTCCCAGCCTGCTTCATACCAGCGACGATTCTTAGTTACTAGGTC
TGGCAGGAAAATTAAAGGAAGAGGACCGAGGCGTTATCGAACTCCTTCCAGATCCAGATCGAGGGATCGA
TTCAGACGAAGTGAGACTCCTCCACATTGGAGACAAGAGATGCAGAGAGCTCAGAGAATGAGGGTGTCAA
GTGGTGAAAGATGGATCAAAGGGGATAAGAGTGAGTTAAATGAAATAAAAGAAAATCAAAGGAGCCCAGT
TAGAGTAAAAGAGAAAAAAATAACAGATCACAGACACATGTCTGAGAGTCCAAACAGAAAAGTAGAAAAG
GAAAAGAAAGCTAAAGACCATAAATCTGAAAGCAAAGAGAGAGACATCAGAAGAAATTCAGAAAAAGATG
ATAAATATAACAAAAACAAAGTGAAGAAAAGGGGCAAATCCAAGAGTAGGAGCAAGAGCAAGGAGAGATC
CAAGAGTAAGGAGCGAGACTCGAAGCACAGCAGACACGAAGACAAGAGGGTGAGGTCAAGAAGTAAAGAA
AGGGATCATGAGACTACTAAAGAAAAAGAAAAACCACTGGATCCTAAAGGGAAAGATCAGGAAAGGAGTA
GAAGCAAAGAGAACTCCAAACAGGTAGAATCAAAAAGTAATGAACATGATCATAGCAAAAGTAAAGAAAA
GGATAGACGTGCACAGTCCAGGAGTAGAGAACGGGATCTGACTAAAAGTAAACACAGTTACAACAGTAGA
ACAAGGGAGCGGAGCAGAAGTAGGGACAGGAGCAGAAGAGTGCGGTCCAGAAGCCACGACAGAGATCGCA
GCAGAAGCAAGGAGTACCATAGATACAGAGAACAGGAGTATAGGAGAAGAGGAAGGTCACGAAGCCGGGA
TCGAAGAACGCCAGGACGATCGAGAAGTAAAGATAGGAGGAGAAGAAGGAGGGATTCCCGGAGCTCAGAG
AGAGAAGAAAGTCAAAGTAGAAACAAAGATAAATATAGAAGCCAAGAAAGTAAGAGTTCACACAGAAAAG
AAAATTCTGAGGGTGAGAAAAGAACGTACTCTAAAAGTCGTGATCATAATAGCTCAAGTAATAACAGGGA
AAAAAAGGCTGATAGAGAGCAAAGTCCAGTGTCAAAAACAAAGCAAAGCAGTCAGGACAATGAAGTGAAG
TCCTCCACATTAAAAAATCAAGAGGACGAAAAGACCAGATCCCCGGTGGAAAAAGAAAACCAAAAATCAA
AGGGTCAAGAAAATGACCATGTACATGACAAAAATAAAAAATGTGATCATGAATCAAGCCCTGGAACAGA
TGAAGACAAAAGTGGATGA

Translation (752 aa):
MGIKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVK
DFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVV
FGQVISGQEVVREIENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSSSSSSSDSDSSSDSQS
SSESSDSESASEEKSRKRKKKHRKNSRKHKKEKKKRKKSKKSPSSESEAENVDAQPQSTVRPEEIPPIPE
NRFLMRKSPPKADDKERKNRERERERECNPPNSQPASYQRRFLVTRSGRKIKGRGPRRYRTPSRSRSRDR
FRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKEKKITDHRHMSESPNRKVEK
EKKAKDHKSESKERDIRRNSEKDDKYNKNKVKKRGKSKSRSKSKERSKSKERDSKHSRHEDKRVRSRSKE
RDHETTKEKEKPLDPKGKDQERSRSKENSKQVESKSNEHDHSKSKEKDRRAQSRSRERDLTKSKHSYNSR
TRERSRSRDRSRRVRSRSHDRDRSRSKEYHRYREQEYRRRGRSRSRDRRTPGRSRSKDRRRRRRDSRSSE
REESQSRNKDKYRSQESKSSHRKENSEGEKRTYSKSRDHNSSSNNREKKADREQSPVSKTKQSSQDNEVK
SSTLKNQEDEKTRSPVEKENQKSKGQENDHVHDKNKKCDHESSPGTDEDKSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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