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Report for CCDS37657.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37657.1 Public Mus musculus 17 Zfp959 23 108 98 CCDS HistoryNCBI Gene:224893Re-query CCDS DB by CCDS ID:37657.1Re-query CCDS DB by GeneID:224893See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37657.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000054780.9 ENSMUSP00000053979.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000054780.9Link to Ensembl Protein Viewer:ENSMUSP00000053979.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000054780Re-query CCDS DB by Protein ID:ENSMUSP00000053979
Original member NCBI NM_145490.4 NP_663465.1 Updated not alive Link to Nucleotide Sequence:NM_145490.4Link to Protein Sequence:NP_663465.1Re-query CCDS DB by Nucleotide ID:NM_145490Re-query CCDS DB by Protein ID:NP_663465
Current member NCBI NM_145490.5 NP_663465.1 Accepted alive Link to Nucleotide Sequence:NM_145490.5Link to Protein Sequence:NP_663465.1Re-query CCDS DB by Nucleotide ID:NM_145490Re-query CCDS DB by Protein ID:NP_663465Link to BLAST:NP_663465.1

Chromosomal Locations for CCDS 37657.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 55892184 55892186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 55895821 55895947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 55896141 55896201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 55897156 55898584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1620 nt):
ATGGATGCAATGACCTATGAGGATGTGCATGTGAACTTCTCTCGGGAAGAGTGGGCTTTGCTGGATCCTT
CTCAGAAGAGTCTCTACAAGGATGTGATGCTGGAAACCTACTGGAACCTGACTTGTATAGGCTACATGTG
GGAAGACTGCAATATTGAGGATCATTGTCAAAGTTCTAGAAGACATGGAAGGTGTATCAACTGTCCCTCT
GCATATGGAAAGAAGCAGTGTACCAATCTCTTTCCTAGAACAATTAGAAGAAGATATGTAGTCACCCCCT
TTGTGAGAAGAGGAGGTGAATGTGATACAAGTTTACAAGTACTTGGTTTTCCAGTTTCAGTGGGAATACA
TCAAAATACTGACCGTGGAGAAAAGCCCTCTGTGGACAAGGAAAGTGGAAAATCTCCTGTCTGTCCTGGT
TCACTTTGCACATGTAGAGTGACTCACTCTATAGGAGAATGTTATGAATGCAGTCAGTGTGGTAAAGCTC
TGAGTTGTTCTCTTCAGAGACGTGTCCAAACTCATATGGGAAAAGGAAATGATAAATGTGAGCCAAGTAG
TAAAAGCTTAACCCATCCCAGGTATCTTCAAATACAGAAGACGGCCTATAATGAAGAGGACCTCTATGTG
TGGAATCAATGTGGTAAATCCTCTTTACAACTACACCAAAGAAATCATTTGGGAATGAAATCCTGTGAAT
ATAATCATGAAGATAAACTCATTTCACATCAGAATTGTAATCAAGTAGGTAGAACTAATACTAGAGACAC
AAAGCATGACTATCATCAATGGGGTAAAGCCTTCACATGTCCCAGTTATCTTCAAATATATGAAAGAATT
CATACTGAAGAGAAACCCTATGAATGTAGTCAATGTGGTAGAGCCTTTACATGTCACAGTACTCTTCAAA
TCCATGAAAGAATTCATACTGGAGAGAAACCCTATAAATGTAATCAGTGTGATAAAACCTTTGCATGTAA
GAGGTATCTTCAAATCCATGAAAAAATTCATACTGGAGAGAAACCCTATAAATGTAATCAGTGTGGTAAA
ACCTTTGCATGTAAGAGGTATCTTCAAGTACATGAAAGAATTCATGCTGCAGAGAAACTCTATAAATGTA
ATCAGTGTGGTAAAGCCTTTGCATGTAATAGTTATCTTCAAATGCATGAAAGAATTCATACTGGTGAGAA
ACCCTATAAATGTAATCACTGTGGTAAGGCCTTTGCATGTAACAGCAACCTTCAAAAGCATGAAAGAATT
CATACTGGAGAGAAGCGGTATAAGTGTAAGCAATGTGGTAAAGCCTTTGCATATAGCAGCAATCTTCAAA
AGCATGAAAGAACACATACTGGAGAGAAACCCTATAAATGTAATCAATGTGGTAAAGCCTTTACATGTCA
CAGTAGTCTTCAAATCCATGAAAGAATACATACTGGAGAGAAACCCTATAAATGTAACCAATGTGGTAAA
CCCTTTGATCGTAAAAGGTATCTTCATATTCATGAAAGAATACACACTGGAGAGAAACCCTATGAGTGTA
ATCAATGTGGTAAATCCTTTGCATATAGCAGTAGTCTTCAAAAGCATGAAAGAATTCACACCGACAAAAA
CATCCCCTAG

Translation (539 aa):
MDAMTYEDVHVNFSREEWALLDPSQKSLYKDVMLETYWNLTCIGYMWEDCNIEDHCQSSRRHGRCINCPS
AYGKKQCTNLFPRTIRRRYVVTPFVRRGGECDTSLQVLGFPVSVGIHQNTDRGEKPSVDKESGKSPVCPG
SLCTCRVTHSIGECYECSQCGKALSCSLQRRVQTHMGKGNDKCEPSSKSLTHPRYLQIQKTAYNEEDLYV
WNQCGKSSLQLHQRNHLGMKSCEYNHEDKLISHQNCNQVGRTNTRDTKHDYHQWGKAFTCPSYLQIYERI
HTEEKPYECSQCGRAFTCHSTLQIHERIHTGEKPYKCNQCDKTFACKRYLQIHEKIHTGEKPYKCNQCGK
TFACKRYLQVHERIHAAEKLYKCNQCGKAFACNSYLQMHERIHTGEKPYKCNHCGKAFACNSNLQKHERI
HTGEKRYKCKQCGKAFAYSSNLQKHERTHTGEKPYKCNQCGKAFTCHSSLQIHERIHTGEKPYKCNQCGK
PFDRKRYLHIHERIHTGEKPYECNQCGKSFAYSSSLQKHERIHTDKNIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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