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Report for CCDS37250.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37250.1 Public Mus musculus 16 Emp2 23 108 98 CCDS HistoryNCBI Gene:13731Re-query CCDS DB by CCDS ID:37250.1Re-query CCDS DB by GeneID:13731See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37250.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000078357.4 ENSMUSP00000077466.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000078357.4Link to Ensembl Protein Viewer:ENSMUSP00000077466.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000078357Re-query CCDS DB by Protein ID:ENSMUSP00000077466
Original member Current member NCBI NM_007929.2 NP_031955.2 Accepted alive Link to Nucleotide Sequence:NM_007929.2Link to Protein Sequence:NP_031955.2Re-query CCDS DB by Nucleotide ID:NM_007929Re-query CCDS DB by Protein ID:NP_031955Link to BLAST:NP_031955.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031955.2 172 O88662 172 100% 0 0

Chromosomal Locations for CCDS 37250.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 10284428 10284615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 10285455 10285601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 10288055 10288160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 10292262 10292339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGTTGGTGATTCTTGCCTTCATCATTGTCTTCCACATCGTGTCCACGGCACTCCTGTTCATTTCTACCA
TT
GACAATGCCTGGTGGGTAGGCGACAGCTTCTCTGCTGACCTCTGGAGAGTGTGCACCAACAGCACAAA
C
TGTACCGAGATCAATGAGCTGACCGGCCCTGAAGCGTTTGAAGGTTATTCTGTGATGCAGGCGGTGCAG
GCC
ACCATGATCCTCTCCACCATCCTCTCCTGCATCTCCTTCCTCATCTTTCTGCTCCAGCTCTTCCGCC
TC
AAGCAGGGAGAGAGGTTCGTCCTGACGTCCATCATCCAGCTCATGTCCTGTCTGTGTGTCATGATCGG
A
GCTTCCATCTATACAGACCGGCGCCAAGACCTTCACCAACAGAACAGAAAACTCTATTACCTACTGCAA
GAA
GGCAGCTACGGCTACTCTTTCATCCTGGCCTGGGTGGCCTTTGCCTTCACTTTCATCAGCGGCCTCA
TG
TACATGATCCTGAGGAAGCGTAAATAA


Translation (172 aa):
MLVILAFIIVFHIVSTALLFISTIDNAWWVGDSFSADLWRVCTNSTNCTEINELTGPEAFEGYSVMQAVQ
A
TMILSTILSCISFLIFLLQLFRLKQGERFVLTSIIQLMS
CLCVMIGASIYTDRRQDLHQQNRKLYYLLQ
E
GSYGYSFILAWVAFAFTFISGLMYMILRKRK




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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