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Report for CCDS34742.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34742.1 Public Homo sapiens 7 ASB15 24 110 108 CCDS HistoryNCBI Gene:142685Re-query CCDS DB by CCDS ID:34742.1Re-query CCDS DB by GeneID:142685See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34742.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275699.4 ENSP00000275699.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000275699.4Link to Ensembl Protein Viewer:ENSP00000275699.3Re-query CCDS DB by Nucleotide ID:ENST00000275699Re-query CCDS DB by Protein ID:ENSP00000275699
Original member Current member EBI ENST00000434204.5 ENSP00000390963.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434204.5Link to Ensembl Protein Viewer:ENSP00000390963.1Re-query CCDS DB by Nucleotide ID:ENST00000434204Re-query CCDS DB by Protein ID:ENSP00000390963
Original member Current member EBI ENST00000451558.5 ENSP00000397655.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000451558.5Link to Ensembl Protein Viewer:ENSP00000397655.1Re-query CCDS DB by Nucleotide ID:ENST00000451558Re-query CCDS DB by Protein ID:ENSP00000397655
Original member Current member EBI ENST00000451215.6 ENSP00000416433.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000451215.6Link to Ensembl Protein Viewer:ENSP00000416433.1Re-query CCDS DB by Nucleotide ID:ENST00000451215Re-query CCDS DB by Protein ID:ENSP00000416433
Original member Current member NCBI NM_001290258.2 NP_001277187.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001290258.2Link to Protein Sequence:NP_001277187.1Re-query CCDS DB by Nucleotide ID:NM_001290258Re-query CCDS DB by Protein ID:NP_001277187Link to BLAST:NP_001277187.1
Original member Current member NCBI NM_080928.4 NP_563616.3 Accepted alive Link to Nucleotide Sequence:NM_080928.4Link to Protein Sequence:NP_563616.3Re-query CCDS DB by Nucleotide ID:NM_080928Re-query CCDS DB by Protein ID:NP_563616Link to BLAST:NP_563616.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277187.1 588 Q8WXK1 588 100% 0 0
NP_563616.3 588 Q8WXK1 588 100% 0 0

Chromosomal Locations for CCDS 34742.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 123614503 123614609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123616221 123616273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123616364 123616495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123617579 123617737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123624569 123624814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123627110 123627281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123628864 123629434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123629966 123630119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123636809 123636981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1767 nt):
ATGGATACTAATGATGACCCTGATGAAGACCATCTTACAAGTTATGATATTCAGCTAAGTATTCAAGAAT
CCATTGAAGCCAGCAAGACTGCACTTTGTCCTGAAAGATTTGTACCCCTAAGTGCTCAAAACAGAAAACT
TGTGGAGGCCATAAAACAAGGTCACATTCCTGAGCTCCAGGAGTATGTAAAATATAAATATGCAATGGAT
GAAGCTGATGAAAAAGGATGGTTTCCATTGCATGAAGCTGTTGTTCAACCCATTCAACAAATACTTGAGA
TTGTTCTGGATGCATCCTATAAGACACTCTGGGAATTCAAGACCTGTGATGGAGAAACACCCTTGACTTT
GGCAGTCAAAGCTGGTCTGGTGGAAAATGTAAGAACTTTATTAGAAAAGGGAGTGTGGCCCAACACAAAA
AATGATAAAGGAGAGACCCCCCTTCTGATTGCTGTGAAAAAGGGCTCCTATGACATGGTGTCGACTCTGA
TCAAACATAACACTAGCCTAGACCAGCCCTGTGTCAAGCGATGGTCAGCAATGCATGAAGCAGCCAAGCA
AGGCCGAAAAGATATCGTAGCTCTGCTGCTGAAACATGGAGGCAATGTCCACCTGAGAGATGGATTTGGA
GTCACACCACTAGGCGTCGCTGCCGAGTATGGTCACTGTGACGTGTTAGAACATCTAATCCACAAAGGTG
GTGATGTGCTTGCTTTGGCGGATGATGGGGCGTCGGTGCTGTTTGAGGCAGCAGGAGGTGGCAATCCCGA
CTGCATTTCCCTCCTGCTGGAATATGGAGGAAGCGGAAATGTACCTAACCGAGCAGGACATCTTCCTATA
CACCGAGCTGCCTATGAGGGGCATTATCTTGCACTGAAATATCTTATCCCAGTAACATCTAAAAATGCAA
TTCGGAAAAGTGGGCTAACACCAATTCACTCAGCAGCAGATGGACAAAATGCACAGTGTCTAGAACTGCT
CATTGAAAATGGTTTTGATGTCAACACTCTACTTGCTGACCACATTTCCCAGAGCTATGACGATGAGAGG
AAGACTGCGCTGTATTTTGGCGTTTCTAATAATGACGTTCATTGCACAGAAGTCCTTCTGGCTGCAGGTG
CAGACCCAAACTTAGATCCCCTCAACTGTCTACTTGTTGCAGTGAGGGCCAATAATTATGAAATTGTCAG
GCTGCTTCTCTCCCATGGAGCTAATGTCAATTGTTATTTTATGCATGTGAATGACACTCGTTTCCCCAGT
GTCATTCAATATGCTCTAAACGACGAGGTAATGCTGAGGCTATTGCTGAATAATGGCTATCAAGTGGAGA
TGTGCTTTGACTGCATGCATGGTGACATCTTTGGAAATTCATTTGTGTGGTCAGAGATACAGGAAGAGGT
GCTGCCAGGATGGACATCTTGTGTAATAAAAGATAACCCGTTCTGTGAGTTTATTACAGTTCCTTGGATG
AAGCACTTGGTAGGCAGAGTTACTCGTGTACTAATAGATTACATGGATTATGTTCCTCTGTGTGCTAAAC
TGAAGTCTGCACTAGAAGTACAGAGAGAATGGCCAGAAATCCGCCAAATACTAGAGAATCCTTGTTCATT
GAAGCATTTGTGTCGGTTAAAAATTCGAAGGCTTATGGGTCTCCAGAAACTCTGCCAGCCAGCCTCAGTG
GAGAAGCTTCCTCTACCACCAGCTATTCAAAGATACATATTATTTAAAGAGTATGATCTCTATGGACAAG
AGCTAAAATTGACATAA

Translation (588 aa):
MDTNDDPDEDHLTSYDIQLSIQESIEASKTALCPERFVPLSAQNRKLVEAIKQGHIPELQEYVKYKYAMD
EADEKGWFPLHEAVVQPIQQILEIVLDASYKTLWEFKTCDGETPLTLAVKAGLVENVRTLLEKGVWPNTK
NDKGETPLLIAVKKGSYDMVSTLIKHNTSLDQPCVKRWSAMHEAAKQGRKDIVALLLKHGGNVHLRDGFG
VTPLGVAAEYGHCDVLEHLIHKGGDVLALADDGASVLFEAAGGGNPDCISLLLEYGGSGNVPNRAGHLPI
HRAAYEGHYLALKYLIPVTSKNAIRKSGLTPIHSAADGQNAQCLELLIENGFDVNTLLADHISQSYDDER
KTALYFGVSNNDVHCTEVLLAAGADPNLDPLNCLLVAVRANNYEIVRLLLSHGANVNCYFMHVNDTRFPS
VIQYALNDEVMLRLLLNNGYQVEMCFDCMHGDIFGNSFVWSEIQEEVLPGWTSCVIKDNPFCEFITVPWM
KHLVGRVTRVLIDYMDYVPLCAKLKSALEVQREWPEIRQILENPCSLKHLCRLKIRRLMGLQKLCQPASV
EKLPLPPAIQRYILFKEYDLYGQELKLT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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