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Report for CCDS34693.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34693.1 Public Homo sapiens 7 ZNF789 24 110 108 CCDS HistoryNCBI Gene:285989Re-query CCDS DB by CCDS ID:34693.1Re-query CCDS DB by GeneID:285989See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34693.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331410.10 ENSP00000331927.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331410.10Link to Ensembl Protein Viewer:ENSP00000331927.5Re-query CCDS DB by Nucleotide ID:ENST00000331410Re-query CCDS DB by Protein ID:ENSP00000331927
Original member Current member NCBI NM_213603.3 NP_998768.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_213603.3Link to Protein Sequence:NP_998768.2Re-query CCDS DB by Nucleotide ID:NM_213603Re-query CCDS DB by Protein ID:NP_998768Link to BLAST:NP_998768.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_998768.2 425 Q5FWF6-1 425 100% 0 0

Chromosomal Locations for CCDS 34693.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99476457 99476480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99479661 99479787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99484030 99484143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99486476 99487488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGTTCCCACCAGCCAGGGGGAAGGAGCTGCTCTCGTTTGAGGATGTGGCGATGTACTTCACCAGAGAGG
AGTGGGGCCACCTCAACTGGGGTCAGAAGGACCTCTACCGAGATGTGATGTTGGAGAACTACAGGAACAT
GGTCTTGCTGGGATTTCAGTTTCCCAAACCTGAGATGATCTGTCAGCTGGAGAACTGGGACGAGCAGTGG
ATCCTGGATCTACCGAGAACTGGGAATAGGAAGGCTTCCGGTAGTGCTTGCCCAGGTTCTGAAGCCAGAC
ACAAGATGAAAAAGCTAACTCCAAAACAGAAATTTTCTGAAGATTTAGAGTCATATAAGATATCAGTGGT
AATGCAGGAATCAGCTGAGAAACTTTCAGAAAAGTTACATAAGTGTAAAGAATTTGTGGACAGTTGCAGG
CTTACTTTCCCTACTAGTGGTGATGAATACAGCAGGGGCTTCCTTCAAAACCTTAACCTTATTCAAGATC
AGAATGCGCAAACAAGGTGGAAGCAGGGCAGATATGATGAGGATGGCAAACCCTTCAATCAAAGATCTTT
GCTTTTGGGGCATGAGCGAATTCTCACAAGAGCAAAGTCTTATGAATGCAGTGAATGTGGAAAAGTCATT
AGGCGTAAGGCATGGTTTGATCAACATCAAAGAATTCACTTTTTAGAGAATCCTTTTGAGTGTAAGGTCT
GTGGGCAAGCCTTCAGACAGCGGTCAGCTCTTACGGTCCATAAACAGTGTCACCTGCAAAACAAGCCATA
CAGATGTCATGACTGTGGAAAGTGTTTTCGGCAGCTCGCGTATCTTGTTGAACATAAGAGGATTCACACC
AAAGAAAAACCTTATAAATGTAGCAAATGTGAAAAAACGTTTAGTCAGAATTCAACCCTTATTCGACATC
AGGTGATCCATAGTGGAGAAAAACGCCATAAATGCCTTGAGTGTGGAAAAGCCTTTGGCCGGCATTCAAC
CCTTCTATGTCATCAACAGATTCACAGTAAACCGAACACCCATAAATGCAGTGAATGTGGACAGTCCTTT
GGTAGGAATGTGGATCTCATTCAGCATCAAAGAATCCATACAAAGGAGGAATTCTTTCAATGTGGAGAAT
GTGGGAAAACGTTTAGTTTTAAGAGGAATCTTTTTCGACATCAGGTCATTCACACTGGAAGCCAACCCTA
CCAATGTGTCATATGTGGAAAATCTTTCAAGTGGCACACAAGCTTTATTAAGCACCAGGGCACTCACAAA
GGACAGATATCCACATGA

Translation (425 aa):
MFPPARGKELLSFEDVAMYFTREEWGHLNWGQKDLYRDVMLENYRNMVLLGFQFPKPEMICQLENWDEQW
ILDLPRTGNRKASGSACPGSEARHKMKKLTPKQKFSEDLESYKISVVMQESAEKLSEKLHKCKEFVDSCR
LTFPTSGDEYSRGFLQNLNLIQDQNAQTRWKQGRYDEDGKPFNQRSLLLGHERILTRAKSYECSECGKVI
RRKAWFDQHQRIHFLENPFECKVCGQAFRQRSALTVHKQCHLQNKPYRCHDCGKCFRQLAYLVEHKRIHT
KEKPYKCSKCEKTFSQNSTLIRHQVIHSGEKRHKCLECGKAFGRHSTLLCHQQIHSKPNTHKCSECGQSF
GRNVDLIQHQRIHTKEEFFQCGECGKTFSFKRNLFRHQVIHTGSQPYQCVICGKSFKWHTSFIKHQGTHK
GQIST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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