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Report for CCDS34307.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34307.1 Public Homo sapiens 5 N4BP3 24 110 108 CCDS HistoryNCBI Gene:23138Re-query CCDS DB by CCDS ID:34307.1Re-query CCDS DB by GeneID:23138See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34307.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000274605.6 ENSP00000274605.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000274605.6Link to Ensembl Protein Viewer:ENSP00000274605.4Re-query CCDS DB by Nucleotide ID:ENST00000274605Re-query CCDS DB by Protein ID:ENSP00000274605
Original member Current member NCBI NM_015111.2 NP_055926.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015111.2Link to Protein Sequence:NP_055926.1Re-query CCDS DB by Nucleotide ID:NM_015111Re-query CCDS DB by Protein ID:NP_055926Link to BLAST:NP_055926.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055926.1 544 O15049 544 100% 0 0

Chromosomal Locations for CCDS 34307.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 178119584 178119913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178120178 178120699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178121098 178121352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 178121474 178122001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGGCCACAGCCCCAGGCCCTGCTGGCATTGCCATGGGCAGCGTGGGCAGCCTGTTGGAACGGCAGGACT
TCTCCCCTGAAGAGCTGCGGGCGGCACTTGCCGGGTCTCGGGGCTCCCGCCAGCCTGATGGGCTCCTCCG
GAAGGGCTTGGGCCAGCGTGAGTTCCTCAGCTACCTGCACCTCCCCAAGAAGGACAGCAAGAGCACCAAG
AACACCAAGCGGGCCCCTCGGAACGAGCCTGCCGACTATGCCACCCTCTACTACCGGGAACATTCTCGCG
CGGGTGACTTCAGCAAGACCTCGCTGCCAGAACGGGGTCGCTTTGACAAGTGCCGCATTCGCCCCTCAGT
GTTCAAGCCTACGGCGGGCAACGGGAAAGGCTTCCTATCCATGCAAAGTCTGGCGTCCCACAAAGGCCAG
AAGCTGTGGCGCAGCAATGGCAGCCTGCACACGCTGGCCTGCCACCCGCCCCTGAGCCCCGGGCCCCGGG
CCAGCCAGGCCCGGGCACAGCTGCTGCACGCCCTCAGCCTAGATGAGGGCGGCCCTGAGCCCGAGCCCAG
CCTGTCCGACTCCTCCAGTGGGGGTAGTTTTGGTCGCAGTCCTGGTACTGGCCCTAGCCCCTTCAGCTCC
TCCCTTGGCCACCTTAACCACCTCGGGGGCTCCCTGGACCGGGCCTCTCAAGGACCCAAGGAGGCTGGGC
CACCAGCTGTGCTGAGCTGCCTGCCCGAGCCACCACCCCCCTACGAGTTCTCCTGCTCCTCTGCCGAGGA
AATGGGAGCCGTGCTGCCCGAGACCTGTGAGGAGCTCAAGAGGGGCCTTGGCGATGAGGACGGCTCCAAC
CCCTTCACGCAGGTGCTGGAGGAGCGCCAGCGGCTGTGGCTGGCTGAGCTGAAGCGCCTGTATGTGGAGC
GGCTGCACGAGGTGACCCAGAAGGCTGAGCGCAGCGAGCGCAACCTCCAGCTGCAGCTGTTTATGGCTCA
GCAGGAGCAGCGGCGCCTGCGCAAGGAGCTGCGGGCTCAGCAGGGCCTGGCTCCGGAGCCTCGGGCCCCC
GGCACCCTCCCAGAGGCTGACCCCAGTGCACGACCAGAGGAGGAAGCCCGATGGGAGGTGTGCCAGAAGA
CAGCAGAGATTAGCCTCTTGAAGCAGCAGCTGCGTGAAGCCCAGGCGGAACTGGCCCAGAAGCTGGCGGA
GATCTTCAGTCTGAAGACACAACTTCGGGGCAGCCGGGCACAAGCCCAGGCTCAGGACGCAGAGCTGGTC
CGGCTGCGCGAGGCTGTGCGCAGCCTGCAGGAGCAGGCCCCTCGGGAGGAAGCCCCAGGCAGCTGTGAGA
CTGATGACTGCAAGAGCAGGGGCCTGCTAGGGGAGGCAGGAGGCAGCGAGGCCAGAGACAGTGCTGAGCA
GCTGCGGGCTGAGCTGCTGCAGGAGCGACTTCGGGGCCAGGAGCAGGCGCTGCGCTTTGAGCAGGAGCGG
CGGACTTGGCAGGAGGAGAAGGAGCGCGTGCTGCGCTACCAGCGGGAGATCCAGGGAGGGTACATGGACA
TGTACCGCCGCAACCAGGCACTGGAGCAGGAACTGCGGGCACTGCGGGAGCCCCCCACACCCTGGAGTCC
CCGGCTCGAGTCCTCCAAGATCTGA

Translation (544 aa):
MATAPGPAGIAMGSVGSLLERQDFSPEELRAALAGSRGSRQPDGLLRKGLGQREFLSYLHLPKKDSKSTK
NTKRAPRNEPADYATLYYREHSRAGDFSKTSLPERGRFDKCRIRPSVFKPTAGNGKGFLSMQSLASHKGQ
KLWRSNGSLHTLACHPPLSPGPRASQARAQLLHALSLDEGGPEPEPSLSDSSSGGSFGRSPGTGPSPFSS
SLGHLNHLGGSLDRASQGPKEAGPPAVLSCLPEPPPPYEFSCSSAEEMGAVLPETCEELKRGLGDEDGSN
PFTQVLEERQRLWLAELKRLYVERLHEVTQKAERSERNLQLQLFMAQQEQRRLRKELRAQQGLAPEPRAP
GTLPEADPSARPEEEARWEVCQKTAEISLLKQQLREAQAELAQKLAEIFSLKTQLRGSRAQAQAQDAELV
RLREAVRSLQEQAPREEAPGSCETDDCKSRGLLGEAGGSEARDSAEQLRAELLQERLRGQEQALRFEQER
RTWQEEKERVLRYQREIQGGYMDMYRRNQALEQELRALREPPTPWSPRLESSKI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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