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Report for CCDS33717.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33717.1 Public Homo sapiens 3 NKIRAS1 24 110 108 CCDS HistoryNCBI Gene:28512Re-query CCDS DB by CCDS ID:33717.1Re-query CCDS DB by GeneID:28512See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33717.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388759.7 ENSP00000373411.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000388759.7Link to Ensembl Protein Viewer:ENSP00000373411.3Re-query CCDS DB by Nucleotide ID:ENST00000388759Re-query CCDS DB by Protein ID:ENSP00000373411
Original member Current member EBI ENST00000421515.6 ENSP00000392307.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421515.6Link to Ensembl Protein Viewer:ENSP00000392307.2Re-query CCDS DB by Nucleotide ID:ENST00000421515Re-query CCDS DB by Protein ID:ENSP00000392307
Original member Current member EBI ENST00000443659.6 ENSP00000393785.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443659.6Link to Ensembl Protein Viewer:ENSP00000393785.2Re-query CCDS DB by Nucleotide ID:ENST00000443659Re-query CCDS DB by Protein ID:ENSP00000393785
Original member Current member EBI ENST00000416026.2 ENSP00000394214.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000416026.2Link to Ensembl Protein Viewer:ENSP00000394214.2Re-query CCDS DB by Nucleotide ID:ENST00000416026Re-query CCDS DB by Protein ID:ENSP00000394214
Original member Current member EBI ENST00000425478.7 ENSP00000400385.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000425478.7Link to Ensembl Protein Viewer:ENSP00000400385.2Re-query CCDS DB by Nucleotide ID:ENST00000425478Re-query CCDS DB by Protein ID:ENSP00000400385
Original member Current member EBI ENST00000614374.4 ENSP00000483749.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000614374.4Link to Ensembl Protein Viewer:ENSP00000483749.1Re-query CCDS DB by Nucleotide ID:ENST00000614374Re-query CCDS DB by Protein ID:ENSP00000483749
Original member Current member NCBI NM_001377351.1 NP_001364280.1 Accepted alive Link to Nucleotide Sequence:NM_001377351.1Link to Protein Sequence:NP_001364280.1Re-query CCDS DB by Nucleotide ID:NM_001377351Re-query CCDS DB by Protein ID:NP_001364280Link to BLAST:NP_001364280.1
Original member Current member NCBI NM_001377352.1 NP_001364281.1 Accepted alive Link to Nucleotide Sequence:NM_001377352.1Link to Protein Sequence:NP_001364281.1Re-query CCDS DB by Nucleotide ID:NM_001377352Re-query CCDS DB by Protein ID:NP_001364281Link to BLAST:NP_001364281.1
Original member Current member NCBI NM_001377353.1 NP_001364282.1 Accepted alive Link to Nucleotide Sequence:NM_001377353.1Link to Protein Sequence:NP_001364282.1Re-query CCDS DB by Nucleotide ID:NM_001377353Re-query CCDS DB by Protein ID:NP_001364282Link to BLAST:NP_001364282.1
Original member Current member NCBI NM_001377354.1 NP_001364283.1 Accepted alive Link to Nucleotide Sequence:NM_001377354.1Link to Protein Sequence:NP_001364283.1Re-query CCDS DB by Nucleotide ID:NM_001377354Re-query CCDS DB by Protein ID:NP_001364283Link to BLAST:NP_001364283.1
Original member Current member NCBI NM_001377355.1 NP_001364284.1 Accepted alive Link to Nucleotide Sequence:NM_001377355.1Link to Protein Sequence:NP_001364284.1Re-query CCDS DB by Nucleotide ID:NM_001377355Re-query CCDS DB by Protein ID:NP_001364284Link to BLAST:NP_001364284.1
Original member Current member NCBI NM_001377356.1 NP_001364285.1 Accepted alive Link to Nucleotide Sequence:NM_001377356.1Link to Protein Sequence:NP_001364285.1Re-query CCDS DB by Nucleotide ID:NM_001377356Re-query CCDS DB by Protein ID:NP_001364285Link to BLAST:NP_001364285.1
Original member Current member NCBI NM_001377357.1 NP_001364286.1 Accepted alive Link to Nucleotide Sequence:NM_001377357.1Link to Protein Sequence:NP_001364286.1Re-query CCDS DB by Nucleotide ID:NM_001377357Re-query CCDS DB by Protein ID:NP_001364286Link to BLAST:NP_001364286.1
Original member Current member NCBI NM_001377358.1 NP_001364287.1 Accepted alive Link to Nucleotide Sequence:NM_001377358.1Link to Protein Sequence:NP_001364287.1Re-query CCDS DB by Nucleotide ID:NM_001377358Re-query CCDS DB by Protein ID:NP_001364287Link to BLAST:NP_001364287.1
Original member Current member NCBI NM_001377359.1 NP_001364288.1 Accepted alive Link to Nucleotide Sequence:NM_001377359.1Link to Protein Sequence:NP_001364288.1Re-query CCDS DB by Nucleotide ID:NM_001377359Re-query CCDS DB by Protein ID:NP_001364288Link to BLAST:NP_001364288.1
Original member Current member NCBI NM_001377360.1 NP_001364289.1 Accepted alive Link to Nucleotide Sequence:NM_001377360.1Link to Protein Sequence:NP_001364289.1Re-query CCDS DB by Nucleotide ID:NM_001377360Re-query CCDS DB by Protein ID:NP_001364289Link to BLAST:NP_001364289.1
Original member Current member NCBI NM_001377361.1 NP_001364290.1 Accepted alive Link to Nucleotide Sequence:NM_001377361.1Link to Protein Sequence:NP_001364290.1Re-query CCDS DB by Nucleotide ID:NM_001377361Re-query CCDS DB by Protein ID:NP_001364290Link to BLAST:NP_001364290.1
Original member Current member NCBI NM_001377362.1 NP_001364291.1 Accepted alive Link to Nucleotide Sequence:NM_001377362.1Link to Protein Sequence:NP_001364291.1Re-query CCDS DB by Nucleotide ID:NM_001377362Re-query CCDS DB by Protein ID:NP_001364291Link to BLAST:NP_001364291.1
Original member Current member NCBI NM_001377363.1 NP_001364292.1 Accepted alive Link to Nucleotide Sequence:NM_001377363.1Link to Protein Sequence:NP_001364292.1Re-query CCDS DB by Nucleotide ID:NM_001377363Re-query CCDS DB by Protein ID:NP_001364292Link to BLAST:NP_001364292.1
Original member Current member NCBI NM_001377364.1 NP_001364293.1 Accepted alive Link to Nucleotide Sequence:NM_001377364.1Link to Protein Sequence:NP_001364293.1Re-query CCDS DB by Nucleotide ID:NM_001377364Re-query CCDS DB by Protein ID:NP_001364293Link to BLAST:NP_001364293.1
Original member Current member NCBI NM_001377380.1 NP_001364309.1 Accepted alive Link to Nucleotide Sequence:NM_001377380.1Link to Protein Sequence:NP_001364309.1Re-query CCDS DB by Nucleotide ID:NM_001377380Re-query CCDS DB by Protein ID:NP_001364309Link to BLAST:NP_001364309.1
Original member Current member NCBI NM_020345.4 NP_065078.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020345.4Link to Protein Sequence:NP_065078.1Re-query CCDS DB by Nucleotide ID:NM_020345Re-query CCDS DB by Protein ID:NP_065078Link to BLAST:NP_065078.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001364280.1 192 Q9NYS0 192 100% 0 0
NP_001364281.1 192 Q9NYS0 192 100% 0 0
NP_001364282.1 192 Q9NYS0 192 100% 0 0
NP_001364283.1 192 Q9NYS0 192 100% 0 0
NP_001364284.1 192 Q9NYS0 192 100% 0 0
NP_001364285.1 192 Q9NYS0 192 100% 0 0
NP_001364286.1 192 Q9NYS0 192 100% 0 0
NP_001364287.1 192 Q9NYS0 192 100% 0 0
NP_001364288.1 192 Q9NYS0 192 100% 0 0
NP_001364289.1 192 Q9NYS0 192 100% 0 0
NP_001364290.1 192 Q9NYS0 192 100% 0 0
NP_001364291.1 192 Q9NYS0 192 100% 0 0
NP_001364292.1 192 Q9NYS0 192 100% 0 0
NP_001364293.1 192 Q9NYS0 192 100% 0 0
NP_001364309.1 192 Q9NYS0 192 100% 0 0
NP_065078.1 192 Q9NYS0 192 100% 0 0

Chromosomal Locations for CCDS 33717.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 23893095 23893337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 23900808 23901049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 23910811 23910904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGGGAAAGGGCTGCAAGGTTGTGGTTTGTGGATTGTTATCTGTGGGGAAAACTGCAATTTTGGAGCAGC
TCCTTTATGGAAATCATACTATTGGAATGGAAGATTGCGAAACAATGGAAGATGTATACATGGCTTCAGT
AGAAACAGACCGAGGAGTAAAAGAACAGTTACATCTTTATGACACCAGAGGTCTACAGGAAGGCGTGGAG
CTGCCAAAGCATTATTTTTCATTTGCTGATGGCTTCGTTCTTGTGTACAGTGTGAATAACCTTGAATCCT
TTCAAAGAGTGGAGCTTCTGAAGAAAGAAATCGATAAGTTCAAAGACAAAAAAGAGGTAGCAATTGTGGT
ATTAGGAAACAAAATCGACCTTTCTGAGCAGAGACAAGTGGACGCTGAAGTGGCACAGCAGTGGGCAAAA
AGTGAGAAAGTAAGACTGTGGGAGGTGACTGTTACAGATCGGAAAACTCTGATTGAACCATTCACTTTAT
TAGCCAGTAAACTTTCTCAACCCCAGAGCAAATCAAGCTTTCCTTTGCCTGGGAGGAAAAACAAAGGGAA
CTCTAATTCTGAGAACTAA

Translation (192 aa):
MGKGCKVVVCGLLSVGKTAILEQLLYGNHTIGMEDCETMEDVYMASVETDRGVKEQLHLYDTRGLQEGVE
LPKHYFSFADGFVLVYSVNNLESFQRVELLKKEIDKFKDKKEVAIVVLGNKIDLSEQRQVDAEVAQQWAK
SEKVRLWEVTVTDRKTLIEPFTLLASKLSQPQSKSSFPLPGRKNKGNSNSEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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