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Report for CCDS31517.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31517.1 Public Homo sapiens 11 OR8I2 24 110 108 CCDS HistoryNCBI Gene:120586Re-query CCDS DB by CCDS ID:31517.1Re-query CCDS DB by GeneID:120586See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31517.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302124.8 ENSP00000303864.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302124.8Link to Ensembl Protein Viewer:ENSP00000303864.2Re-query CCDS DB by Nucleotide ID:ENST00000302124Re-query CCDS DB by Protein ID:ENSP00000303864
Original member Current member NCBI NM_001003750.1 NP_001003750.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001003750.1Link to Protein Sequence:NP_001003750.1Re-query CCDS DB by Nucleotide ID:NM_001003750Re-query CCDS DB by Protein ID:NP_001003750Link to BLAST:NP_001003750.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003750.1 310 Q8N0Y5 310 100% 0 0

Chromosomal Locations for CCDS 31517.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 56093308 56094240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGCTGGCAACAATTTCACTGAGGTTACCGTCTTCATCCTCTCTGGATTTGCAAATCACCCTGAATTAC
AAGTCAGTCTTTTCTTGATGTTTCTCTTCATTTATCTATTCACTGTTTTGGGAAACCTGGGACTGATCAC
GTTAATCAGAATGGATTCTCAGCTTCACACCCCTATGTACTTTTTCCTGAGCAATTTAGCATTTATTGAC
ATATTTTACTCCTCTACTGTAACACCTAAGGCATTGGTGAATTTCCAATCCAATCGGAGATCCATCTCCT
TTGTTGGCTGCTTTGTTCAAATGTACTTTTTTGTTGGATTGGTGTGTTGTGAGTGTTTCCTTCTGGGATC
AATGGCCTACAATCGCTACATAGCAATCTGCAATCCCTTACTGTATTCAGTAGTCATGTCCCAAAAAGTG
TCCAACTGGCTGGGAGTAATGCCATATGTGATAGGCTTCACAAGCTCGCTGATATCTGTCTGGGTGATAA
GCAGTTTGGCGTTCTGTGATTCCAGCATCAATCATTTTTTTTGTGACACCACAGCTCTTTTAGCACTCTC
CTGTGTAGATACATTCGGCACAGAAATGGTGAGCTTTGTCTTAGCTGGATTCACTCTTCTTAGCTCTCTC
CTTATCATCACAGTCACTTATATCATCATCATCTCAGCCATCCTGAGGATCCAGTCAGCAGCAGGCAGGC
AGAAGGCCTTCTCCACCTGCGCATCCCACCTCATGGCTGTAACTATCTTTTATGGGTCTCTGATTTTCAC
CTATTTGCAACCTGATAACACATCATCGCTGACCCAGGCGCAGGTGGCATCTGTATTCTATACGATTGTC
ATTCCCATGCTGAATCCACTCATCTACAGTCTGAGGAACAAAGATGTGAAAAATGCTCTTCTGAGAGTCA
TACATAGAAAACTTTTTCCATGA

Translation (310 aa):
MAGNNFTEVTVFILSGFANHPELQVSLFLMFLFIYLFTVLGNLGLITLIRMDSQLHTPMYFFLSNLAFID
IFYSSTVTPKALVNFQSNRRSISFVGCFVQMYFFVGLVCCECFLLGSMAYNRYIAICNPLLYSVVMSQKV
SNWLGVMPYVIGFTSSLISVWVISSLAFCDSSINHFFCDTTALLALSCVDTFGTEMVSFVLAGFTLLSSL
LIITVTYIIIISAILRIQSAAGRQKAFSTCASHLMAVTIFYGSLIFTYLQPDNTSSLTQAQVASVFYTIV
IPMLNPLIYSLRNKDVKNALLRVIHRKLFP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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